| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3311 |
|---|
| Symbol | |
|---|
| ID | 7267787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 4010047 |
|---|
| End bp | 4011078 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 643568124 |
|---|
| Product | Monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_002464595 |
|---|
| Protein GI | 219850162 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.245145 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00154614 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTT GGCGGCAGCG GATTCGCCCG GAGCAGATCC GTGAGTTGAG TTTGATCGGA
CTGATTGTCA TTGCGCTGCT GATCTTTGGG TGGCAGATTG AAAACTTTTT GTCGGCCCGC
ACCTTTAATC GGATTACTTC CAGTGTTGCC ATTGTCGGTA TGGTGGCAAT TGGGCAGACG
CTGGTCGTGT TGACGCGCAA CATTGATCTG TCGGTGGGAT CGATCGTGGG CTTTACTGCC
TATTTTGTCG GGTCGCAGTT GGCTGCAAAT CCCGGTATAC CACCGGTGAT GGCGGTAGCT
TTAGCAGTGC TGACCGGTGG TGTGTTAGGG TTGGTGAATG GTCTGATCGT CGCTTATGGC
CGGGTACCGG CGATTATCAC AACGCTCGGG ACGCTCGCTA TCTATCGTAT GCTGCTCATC
AACTATGCCA ATGCGCGCAC GATTACGGTC GATTCGTTGC CGTCGTGGGT GGTTGAGCTG
AGCCGGCAGA CACTCTTTAC GATAGGTGAT TTCGCGGTGC GGCCGTTGTT TGCGATCACC
ATTGCTGCCG TGATCGTGTT TCAGTTTGTT CTGGCCTATA CCGTGTTTGG CCGGCGCTTG
TACGCGATTG GCTCTAATCC CGAAGCGGCT CGTTTTGCCG GCTTGCCGGC CCAGCGCACG
GTGTTGGCCG CGTTTGTCCT TTGCGGAATG CTGGCCGGTA TGGCAGGTTT TCTCTTCCTA
GCGCGTTTTG GCAATATTAC GGCGGTGGCC GGGCAAGGGA TCGAGCTAGA GTCGGTTGCT
GCCGTGGTTG TGGGTGGAGT GAATACGTTT GGTGGGGCGG GGACGGTGTT TGGGGCATTG
TTAGGTGCGT TCTTAATCGA TTTGCTGGGT CAAGGACTAT TGCGTTGGTT AGGGATCAGT
GAGTTTTGGC GCGATGCGCT GCTCGGATTG CTGATCCTGC TGGCAGTGGC TTCCGACTCG
GTCATCTTGG GCTGGTTGCG CCGGATTTGG GCCGCACCGG CAATGCGCGC GGAGGTGAGT
AATGAAGGCT AA
|
|---|
| Protein sequence | MNTWRQRIRP EQIRELSLIG LIVIALLIFG WQIENFLSAR TFNRITSSVA IVGMVAIGQT
LVVLTRNIDL SVGSIVGFTA YFVGSQLAAN PGIPPVMAVA LAVLTGGVLG LVNGLIVAYG
RVPAIITTLG TLAIYRMLLI NYANARTITV DSLPSWVVEL SRQTLFTIGD FAVRPLFAIT
IAAVIVFQFV LAYTVFGRRL YAIGSNPEAA RFAGLPAQRT VLAAFVLCGM LAGMAGFLFL
ARFGNITAVA GQGIELESVA AVVVGGVNTF GGAGTVFGAL LGAFLIDLLG QGLLRWLGIS
EFWRDALLGL LILLAVASDS VILGWLRRIW AAPAMRAEVS NEG
|
|---|
| |