Gene Cagg_3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3304 
Symbol 
ID7267778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp4001433 
End bp4002122 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content53% 
IMG OID643568115 
Productiron (metal) dependent repressor, DtxR family 
Protein accessionYP_002464588 
Protein GI219850155 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000325293 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAAACCT TTTCCTATCC CGCATCAAAC CGAATTATCC AACTCACTAC CACCGAAGCG 
GCTTGCTTAA CCACCTTGGC CGATCTGATC GAAACAGAAC CAACCACGAC TGCCGACCAA
TTAGCGCGTT GTTTGCATTT CACCCCCGAA ACGATGCTCT CCACACTACA GAGCCTGTTC
AAGCGACAAC TCATCAATGC GACTACGGTT GGATCGCTTA CACTCACCGC TAACGGTTGG
CTACTGGCCC ACCACTACCT CATCCAACAC CGATTACTCG AACGATTTCT CCTCGACGTT
GTCGGTGTGC CGTGGATATT CGTCCATCGT GAGGCTGCGC GATTAGCCCA GATGGTCTCA
CCATGCTTCA TCGAGCGAGT CATTGTACAC ACGCGCCAAG CAACTGTCTG CCCACACGGC
AACCCTATCC CCGGACGCAG CACGTTCACC GCCGGCGAAG TGTCGTTATC AAATGCACCG
CTCGGTCAAC GCTGTCGTCT CACACGCATT GCTGAATGGA TCTGTTACGA TCCACAGCTC
GTCCGGCATC TATGGAGTTA TGAAATCGTA CCAGGATGCA CACTGATCCG GGTCCCTGAT
CCGTTATCCA AGACGGTTAT CCAACTCAAT CAACGACCGA CCGTGTTAGG CCAACGCATC
GCTCAAGCGC TGTACGTTGT GGTCGAATAG
 
Protein sequence
MQTFSYPASN RIIQLTTTEA ACLTTLADLI ETEPTTTADQ LARCLHFTPE TMLSTLQSLF 
KRQLINATTV GSLTLTANGW LLAHHYLIQH RLLERFLLDV VGVPWIFVHR EAARLAQMVS
PCFIERVIVH TRQATVCPHG NPIPGRSTFT AGEVSLSNAP LGQRCRLTRI AEWICYDPQL
VRHLWSYEIV PGCTLIRVPD PLSKTVIQLN QRPTVLGQRI AQALYVVVE