| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3256 |
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| Symbol | |
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| ID | 7267403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3945235 |
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| End bp | 3948312 |
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| Gene Length | 3078 bp |
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| Protein Length | 1025 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643568077 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_002464550 |
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| Protein GI | 219850117 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.711295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACTG TTGCCCTCCG CCTTATCCTG CTTGTTGCGC TCAGCGCACT GCTCATCGCT
GCGCTCGGTG TTGCCGTCTG GGTCGACAAT GCCTCCTTGC GCGGTGTCGC CGAACGTTCG
CCTATCACGG CCCCCTTCCC CTACAGCGAT GGCCCGGCGC TGGGGGTGAA CGTCTTTAAC
CTCCACCTGG AGCCTGACCC CGTCGCAGTT GACCGGACCT TCGCCCTTGC CCGCGATCTC
GGCGCACGCT ATGCTCGTAT GCAGGTACCC TGGGATGACA TCGAGATTCA TAGCCGCGGT
GATTTTACCG ACCGCCGTAA CGCTGCGACG ATCGGTGTGG TGTCGAGTTG GGATAAGTAC
GACCGCATTG TCGCTGCTGC CGTTGCCCAC AATATCGAGT TGATTATGCG TGTCGACCGG
CCTCCCCCGT GGGCCTGCGC CGCTGCATGC TCGACCCCGG AGTTTCAGGC AGGTTTGGCA
ATCGATGGCA ACTCGATGGC CCCACCCGAT GATCTGACCG ATTATGCTCG CTTTCTCGCC
ATCCTCGTTG AACGTTACCG CGGCCAAGTA CGCTATTTTC AGATTTGGAA TGAGCCGAAT
CTCAAGAATG AATGGGGTTG GCAAACACCC AAACCTGCCG ATTTTCTCGC GCTGCTCCGC
CTTGCTTACG AAGCGGTGAA GACGGCAAAC CCCGATGCAG TCGTGCTCTT CCCCGGTCTA
GCCCCCACCG ACGGTCTCGA TCCGCGGGCG CCAATGACCG AGTTGGAGTA TCTCGATGAA
ATCTATCGGC TTGGCGGCGC TGCCTATTTC GATATTATGG CCGCCCAGAA TTATGGCCTC
GGCCAGCCCC CCTCTGAACA TCGCTATGTC TTTTTGCGCG GACGCGACAA TTGGCGCTGG
GATCGCCCTA TCGATACCCG CAACGATGTG AGCCGGGTGG TGCTGCTGCG CGAGGTGATG
GAACGCCACG GCGATCTGGC GACACCGGTC TGGGTGACGG AGTTTGGTTA TAACGCTGCG
CCGGATCGGA TTCCGTCTGA GCATCGCTTT GTCTGGGGAC CGCCGGTTGA TGAGCTGACA
AAAGGTGCGT ATCTGGTCGC TCAGATTGAG CGCGCCCGCC GCGAATGGCC GTGGATGGGG
GTGATGAATG TCTGGATGTT GCGCTACGGC GGCTATGCCG AGCCGCATCC CGATGATCCT
ACCCCCTACT TTGCACTGGT GAGCCGCGAT TGGCAGCCCT TGCCTTCGTA TGACATCCTG
CAAGATTATG TCAAATCACC GGCAGTCGCT CATGTTGGTG TGCATCGCTG GGATCATCCG
GCAGTGACGA CAACTCCCAC CGGCTGGCAG GTGCGATTTG CCGGCACCGG CATCGAGTTG
CGTGGCGGCA CGCCTACTGC GGCGCTGCTC GATGGTGTGC CGGTCGCACT AGACGGCAAT
GCATTGCGCG GTTTGCCCGA TGCGGTGCAT ACCCTCGAAC TACGCGGCGG CACGCCGCCA
ACCGAGTTCT CCGTGGTGCG GAGCTTGCCA TGGCGTCCGC TTGCCGATTA CGGGCCGTTG
GTGCTGATTG TGGCTTTAGC GGTGACCGCT GCGCTGACAA TGCGCACGGC CCTGCACGTG
CTCGATCATC TGCTGATGCG TTGGCAAACG CTCCCTGCCC ATTGGCGCGA ATGGATCATC
TTTCTCGCCC AAGGTCTCAC CCTCGCAGTG GCCTATCGTG CTTCGGCACA ACTCCCGCTC
ACGATGCTTG GTCTCCTACC GTTTATCGGT TTAGCTATTG CCTATCCTGC ACTTGCCGTG
CGTTGGGTAG CTATCACGGT GCCACTCTAC TTTTTGCCGA AAGGTCTGTT TGACGCTCGG
TTTGGCATTC GCGAGAGCGG TATCTATCTG CCACTCCACG AAGTAGTCTT GCTCATTGCC
GCTCTTGCGA CGGTGGTGCG CGATCGTTCA CATCTCCTGC ACCTTAATCC TACCATCCTC
CGCTCACGAG CCACCCTCAT CGCACTCACA CCTGCATTGC TCGTCTTGAT CGCCGGCGTG
TGGGGTGTGC TGATCGCCGA AGCGCGCGGC CCAGCCTTGC GCGAACTACG TTGGATGATC
GTCGAACCGT TGCTGTTCGC GGCCTTGCTC TGGTGGCACG AGCGACAAGG CCGCCCCACG
CTGATGCCAA CGCTGATCGG TTGGATCGCC GCCGGCGCCG TCTCGGCCCT GGTAGCGATC
GCTCAAGCCG GCGGGATCAA TCTTGTACCG TTGTTCGGTA GCAAAATCGG GTATAGCGAA
GACCTGATCG CCACCGAAGG TGTGATACGC GCCACCGGTT TCTACGGTCA TCCCAACAAC
CTCGGTCTGG CGATGGGGCG GGTTTGGCCG TTGGCGGCAG CGTTGGCGTG GGCTGTATGG
CAGCGGCAAC AACGTTGGTT GGCAATGGTG TTGGCATCCT GTGCAATCCT TAGCCTCGCT
GCTCTTGGCG TTTCATTTTC CCGTGGTGCA TATCTTGGCG CAATCGTTGC CGGCGGGGTA
CTCCTCTTTT TCGCCACACC CCCGCGCTAT CGTTGCCTGT CGCTGATCGC CGGTGGCATT
GTCATCGTTC TCGCAGCCGG AGCTAGCCTT ATCATCGGTA TCGAACGGCT TAGTCTCATG
ACCGGCAGCA GCACCATTCG CCTCGCCACA TGGCGCGCCG CATTGGCAAT GTTGGTCGAT
CATCCGCTGG GGATAGGTCT CGATCAGTTT CTCGTTGTCT ATCCTCGTTA CACCGATCCG
GCCCTGACGA ATACCAACGA GATCTACACT GCCCATCCGC ATAACCTGAT ACTCGATCTC
CTCTTGCGCG GCGGCCCTCT TCTGCTCATC GGGTTAGGCT GGGCTACGTG GTGTATGATC
CGTACCGCAG CTCGCTACCC CACTTTACCA CTCGCCGTTG GGATTACCGC AACAATGGCC
GGGGCACTCG CGCATGGATT AGTCGATGCG TTCTATTTCT GGCCCGATTT GGCGATGAGC
TTCTGGCTCC TCGTAATGAG TAGCCGAATC GGGCTAAGTT CATCAGCGCT TGCTCAATCA
TCGCCGGCCC AAACATAA
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| Protein sequence | MRTVALRLIL LVALSALLIA ALGVAVWVDN ASLRGVAERS PITAPFPYSD GPALGVNVFN
LHLEPDPVAV DRTFALARDL GARYARMQVP WDDIEIHSRG DFTDRRNAAT IGVVSSWDKY
DRIVAAAVAH NIELIMRVDR PPPWACAAAC STPEFQAGLA IDGNSMAPPD DLTDYARFLA
ILVERYRGQV RYFQIWNEPN LKNEWGWQTP KPADFLALLR LAYEAVKTAN PDAVVLFPGL
APTDGLDPRA PMTELEYLDE IYRLGGAAYF DIMAAQNYGL GQPPSEHRYV FLRGRDNWRW
DRPIDTRNDV SRVVLLREVM ERHGDLATPV WVTEFGYNAA PDRIPSEHRF VWGPPVDELT
KGAYLVAQIE RARREWPWMG VMNVWMLRYG GYAEPHPDDP TPYFALVSRD WQPLPSYDIL
QDYVKSPAVA HVGVHRWDHP AVTTTPTGWQ VRFAGTGIEL RGGTPTAALL DGVPVALDGN
ALRGLPDAVH TLELRGGTPP TEFSVVRSLP WRPLADYGPL VLIVALAVTA ALTMRTALHV
LDHLLMRWQT LPAHWREWII FLAQGLTLAV AYRASAQLPL TMLGLLPFIG LAIAYPALAV
RWVAITVPLY FLPKGLFDAR FGIRESGIYL PLHEVVLLIA ALATVVRDRS HLLHLNPTIL
RSRATLIALT PALLVLIAGV WGVLIAEARG PALRELRWMI VEPLLFAALL WWHERQGRPT
LMPTLIGWIA AGAVSALVAI AQAGGINLVP LFGSKIGYSE DLIATEGVIR ATGFYGHPNN
LGLAMGRVWP LAAALAWAVW QRQQRWLAMV LASCAILSLA ALGVSFSRGA YLGAIVAGGV
LLFFATPPRY RCLSLIAGGI VIVLAAGASL IIGIERLSLM TGSSTIRLAT WRAALAMLVD
HPLGIGLDQF LVVYPRYTDP ALTNTNEIYT AHPHNLILDL LLRGGPLLLI GLGWATWCMI
RTAARYPTLP LAVGITATMA GALAHGLVDA FYFWPDLAMS FWLLVMSSRI GLSSSALAQS
SPAQT
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