| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3245 |
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| Symbol | |
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| ID | 7267392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 3931288 |
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| End bp | 3933870 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643568066 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_002464539 |
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| Protein GI | 219850106 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.48627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGAAC AGTGGAACGC GACTCAGGCT CGTTTGCTCG CCGATGTCGG TGTATTTCTC
GTCTCGCTAG GTCGGTCTGA GGCGTTTCAA CAGATTGCTC GTCGTCTTGT CCCTTTGTTA
GGTGATTGGT GCATTATCAT CATCCGTGAT GAACACCACC AACCGCGTCG CGTTGCCGTA
GCCTGTGCCG ATCCAAGCAA GCAGGCGTTA GCTGCTCGAC TTATCCAAGA GGCGGTTCTT
CAAGAGACGT ACTCACCGCC GGTACAGGTA TTGACTACCG GACAACCGCT TTTGCTGCTC
GATCTCCCGG ACGATTATAG TGAGAATCCG AATTTTTCGC CAGCTTACCG CGAGCTTGTA
CGACAAATCA AGCCTCGCCA AGTGTTGTCC CTGCCGATAT GGGTACGAGA TCGGGTGGTA
GGAGTATTGG TTTTGCTCAT TACCGCCCCC TCGCAGCGGC ACTTTGCGCA AGATGATCTC
ATCTTAGCTG CTGAGATAGC TAAACGGCTA GCACTGGCCG TAGAGAATCT CCTCCTCTAT
CGCTCGATGC AGCGTCGTCT CGACCAATTG TTGCTCGTGC AACGGGTTGC CGGTCTGGTC
AATTCAGTAT TGCAGACTGA AAAGCTCTGC CGGTTAGTCG TGCAGCAATT GCACGATACC
TTCGGGTATC ATCTGATAAG TATTTACCTG CTGCAAGACG GTGTATTACG GCAGCAAGCG
GTGGTCGGTT ACGATCAGGT ATTGCCGGTC ATCCAGTTGC ATGAAGGGGT AGCCGGGCGA
GTGATGCGCA CCGGTCAAGC TGAGTTTGTG CGTGATACAA CGGGTGACCC TGATTTTATT
GAGGTGTATC CGGGAACAAC CCAATGTATT GTGGTACCGT TGCGCCACGG TGAGGCGAAG
CCTGTCGGTG TGATTATTGT CGAGTCACTC GGCAATCCGA CGCTTGATGA CGAAGACTTC
TTGTTGCTCT CGTTGCTGGC CGATCAGATT AGCATCGCTC TGCTCAATAC GATGTTGTTC
GCCCGCATAA TAGAATCGTT TGAGCGGTTT CGCTCTCTGA TCGAACTGGC CGGTAACGCG
ATTATTTGTC TCAGCCCGCA GTTGCGCATC ACCGAATTCA ATCGCATGGC AGAGCAGTTG
TTTGGGTACA TGCGCAGTGC GATGATCGGA GCCGACTTCT CAACGACACT CTTGTCGGAA
GCCGAACGAC CGCTGTTTTT GGCGTTGGTG CGCGAAGTTG AGCAGCGTGG TAGCAGTCGG
TCGTTTGAAA CAATCCTTTG TAAGGCAGAT CGCAAACATT ATTTGACGTG GACGGTGACG
TGTCGGCGAC ACCTGAGTGG CGAACTTGCC GAACTACTAC TTGTTTGCCA GGACTTGACC
GAGCAGCGAG AGATGACGGC TGAGTTGCTT CAGTATGAAC GTCGCTTACA GAACCTTGAG
CGGTTAGAGA GTTTAGCGAT TATGGCAGGT GGTATCGCCC ACGATTTTAA CAATCTGCTC
ACTGTCATTG AGGGTAATGC TAATTTTCTT AAAAATGCCA TAACAGCAAC ACATCCGGTC
GATCAATATT TGCAAAATCT CCTCACTGCA ACGCAGCAAG CCGGTGGATT GGTAGAGCAA
TTGCTGCGGT TTGCCGTTGC CGATCCGCTT AAACTACAGC AAATTGACCT AAACCGGTTG
ATTGAGAAAG CCATACCGAT ACTTCAAACC ACGTTGAAAC ATCCCGCAGT GATACGGCTC
GATCTTGATC CGGCTTTGCC ACCGATTCGG GCCGACCCGA CGCAGATTCG GCAAGTGCTG
CTGAATCTCT TTATGAATGC GGTTGATGTG TTGCCGGAGC AGAACGGTTG CATCTGTATA
CAGACAGCGT TGCGCGCGAT TGATGCCAAC GAGTTCGTCG GTTTTATCTC TCCCCACCGG
CTCACGTCCG GTAAGTATGT GACGATGTCA GTACACGACA ACGGGCATGG GATTGATCCG
AAGATGCAGC AACAGATTTT TGAACCATTC TTTACGACAA AGGTGCATGG ACATGGTCTA
GGATTACCGA GTGTACTGAA CATCGTCCGT CAGCATGGCG GTGCAATTGA AGTCAAGAGC
CGACCCGGAG AAGGGAGTAC TTTCACCGTC TGGTTCCCAC CTTTGCAGCC AAGTACTGAA
CAAGGAGCAC TACCAGGTAC CGTTATCGGT AGTGAGTCAC CGTGCGTTTT GGTGGTTGAC
GATAACAAGG ATGTTCGCTC ACTCATCGAA CGGCTGTTAC GTCAGGCCGG TTATCGTGTT
AAGGCGATGG CCAATGGCAG TGAAGCGCTG CACCTTGTGA CGCAGGGACA GGCAATTGCG
TGTGCTTTGG TTGATATTAC GCTCGCCGAC ATCAGTGGTT ATGACGTTTG TCGTCGGATT
GCCGAACTTA ACCCATGCAT TCCCTTGGCA TTGATCAGTG GGTATCCGGT GGAAGCAGCG
AGTATTGGTG AGGTCTCGGT GGCGGCAACG TTACAAAAGC CGTTTCGGGC GCAGGAGTTA
TTGTCGGTGG TGCAGCGATT GATCGAAATC CGGGCCGAGT TATTGAGAAA ACAGAGATGC
TAG
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| Protein sequence | MQEQWNATQA RLLADVGVFL VSLGRSEAFQ QIARRLVPLL GDWCIIIIRD EHHQPRRVAV
ACADPSKQAL AARLIQEAVL QETYSPPVQV LTTGQPLLLL DLPDDYSENP NFSPAYRELV
RQIKPRQVLS LPIWVRDRVV GVLVLLITAP SQRHFAQDDL ILAAEIAKRL ALAVENLLLY
RSMQRRLDQL LLVQRVAGLV NSVLQTEKLC RLVVQQLHDT FGYHLISIYL LQDGVLRQQA
VVGYDQVLPV IQLHEGVAGR VMRTGQAEFV RDTTGDPDFI EVYPGTTQCI VVPLRHGEAK
PVGVIIVESL GNPTLDDEDF LLLSLLADQI SIALLNTMLF ARIIESFERF RSLIELAGNA
IICLSPQLRI TEFNRMAEQL FGYMRSAMIG ADFSTTLLSE AERPLFLALV REVEQRGSSR
SFETILCKAD RKHYLTWTVT CRRHLSGELA ELLLVCQDLT EQREMTAELL QYERRLQNLE
RLESLAIMAG GIAHDFNNLL TVIEGNANFL KNAITATHPV DQYLQNLLTA TQQAGGLVEQ
LLRFAVADPL KLQQIDLNRL IEKAIPILQT TLKHPAVIRL DLDPALPPIR ADPTQIRQVL
LNLFMNAVDV LPEQNGCICI QTALRAIDAN EFVGFISPHR LTSGKYVTMS VHDNGHGIDP
KMQQQIFEPF FTTKVHGHGL GLPSVLNIVR QHGGAIEVKS RPGEGSTFTV WFPPLQPSTE
QGALPGTVIG SESPCVLVVD DNKDVRSLIE RLLRQAGYRV KAMANGSEAL HLVTQGQAIA
CALVDITLAD ISGYDVCRRI AELNPCIPLA LISGYPVEAA SIGEVSVAAT LQKPFRAQEL
LSVVQRLIEI RAELLRKQRC
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