Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3238 |
Symbol | |
ID | 7267385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3923320 |
End bp | 3924627 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643568059 |
Product | pyrimidine-nucleoside phosphorylase |
Protein accession | YP_002464532 |
Protein GI | 219850099 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0213] Thymidine phosphorylase |
TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCGGA TGGTTGAAAT TATTGCCGCG AAACGTGATG GTCGCGCATT GACTACGGCA GAGATCGAGT GGGTCGTGCA AGGATACGCT GCCGGTGAGA TTCCCGATTA TCAGATGGCG GCCTTGGCGA TGGCGATAGT GTTACGCGGC ATGGACGATC GCGAAACCGC CGATTTGACG ATGGCAATAG CGCGCAGCGG CGACATGCTC GATTTACACG ATGTCGCACC TTTAACGGTT GATAAGCATT CAACCGGTGG GGTCGGCGAT AAAACAACGC TCGTGTTGGC ACCGATGGTG GCGGCGGTTG GTTTGCCGGT GGCGAAGATG AGCGGTCGCG GGCTTGGCTT TAGTGGCGGT ACTATTGATA AGCTGGAAAG TATTCCCGGG TTTCGCGCCA ACCTGAGCGC TGAAGAGTTT CGCCGCGCCG TCCGCGAGCC TGGCCTGGTC GTTGCTGCGC AAAGTGGTGA TCTGGCACCG GCCGATAAAA AGCTGTATGC GTTGCGTGAT GTGACCGCAA CCGTCGAGTC CATTCCTCTG ATTGCGGCAA GTGTGATGAG CAAAAAGCTG GCTGCCGGGG CCGATTGTAT CGTACTTGAC GTAAAGTATG GACGTGGTGC CTTTATGCAT ACCCTCGACG ATGCGCGGCA ATTGGCACGC ACAATGGTCG CGATCGGGCG ACACGCCGGC CGGAAGGTGA CGGCCGTGAT CAGCAGTATG CAGCAGCCGC TCGGTTTCGC CATCGGTAAT GCGCTGGAAG TGCGTGAAGC AGTGGCGGCA TTGTGTGGCT CAGGCCCCTC CGATTTGGTG GAGTTGTGTC TCGTTCTTGG CAGTGAATTG GTGTGCATGG CCGGCTTGCG GGATGACCCT GACACAGCGC GTGCCTTGTT GGTCGAAGCG TTGAGCAGTG GTGCAGCATG GGAAAAGTTC CGGGCGATGG TTGCCAATCA GGATGGTGAT GTGACAACGC TTGACCATCC TGATCGATTG CCGAATGCAC CGGTTCAAGT TGATCTGGCA GCACCGCGCG CTGGATTTGT CACTGCAATT GATGGTCAAA CGTTGGGGTT CGTCGTGAAT GCGTTAGGTG GTGGTCGGGT GCGGAAGGAA GATACGATTG ACCACTCAGT CGGGTTGGTT TTACGGGCAA AGGTTGGTGC GCGCGTTGCC GCCGGTGATC CGCTGGTAAC CATCCATGCA GCGCGTCAGA GTGATGTAGA CGCAGTTGCC GAACGGCTTG CCAACGCCTA TACTATTCAT GACACGCCAC CACCATCGTT ACCCCTCGTC GAGGAGATTA TTCGGTGA
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Protein sequence | MMRMVEIIAA KRDGRALTTA EIEWVVQGYA AGEIPDYQMA ALAMAIVLRG MDDRETADLT MAIARSGDML DLHDVAPLTV DKHSTGGVGD KTTLVLAPMV AAVGLPVAKM SGRGLGFSGG TIDKLESIPG FRANLSAEEF RRAVREPGLV VAAQSGDLAP ADKKLYALRD VTATVESIPL IAASVMSKKL AAGADCIVLD VKYGRGAFMH TLDDARQLAR TMVAIGRHAG RKVTAVISSM QQPLGFAIGN ALEVREAVAA LCGSGPSDLV ELCLVLGSEL VCMAGLRDDP DTARALLVEA LSSGAAWEKF RAMVANQDGD VTTLDHPDRL PNAPVQVDLA APRAGFVTAI DGQTLGFVVN ALGGGRVRKE DTIDHSVGLV LRAKVGARVA AGDPLVTIHA ARQSDVDAVA ERLANAYTIH DTPPPSLPLV EEIIR
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