Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3229 |
Symbol | |
ID | 7267376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3913410 |
End bp | 3915752 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643568050 |
Product | hypothetical protein |
Protein accession | YP_002464523 |
Protein GI | 219850090 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.101155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGTGCAA AGCAGGTGTG GCGTTGGCTA TCGGTTCTCG TCATGCTCAC AATAGTGGTT GTCGGGCAGC TTGCACCGGT AGCTGCTCAG AACACCGACG TCAGGCTAAC AGTACGACCG GCATTTCAGG GATTCTTCCA TCCCGGAACG TGGTTACCGG TCGAAGTTGA AGTGGCAAAT GAGGGTGTCG ATCGAACAGC AGAGATTGTC GTAGGCCCGA CCGGTGGCCC TTTTTTTAGT ACGACTCTCG ATCTTCCCGG TGGTAGCCGG AAAGGTGTTA CGGTTTACGT CTATATCTAT AATCAAGCAT CCCGGATCCA GGCACAGTTG TTGGTGAACG GTACCGAAGT AGCAACTGCG ACGGCTCAGG TGCGATCGGT CGGTGAAGGG TTATTGATTG GAGTAGTTGG TACGCAGCAG CCGCGCTTAC CGGCCCAGTT GGAAAATGGG AGCCGAATTA CGACGGTGCC GTTAACATTG GGTGATATTC CGGCCGATGG TCTTGGCCTG TCACCGTTCG ATGCTTTGAT CTTCACCGAT GTTGCCGCAG ATGAACTGCG ATCTGATCAG CGTGAGGCAG TACGAGCATG GGTGTTGCGT GGTGGGACTT TGGTGATCAA CGGTGATTCC GGCTTGGCCC ATACGCTCGC CATCTTGCCC GATGATGTCG TTCCGGTAAC GCTCGACGGT TTCGTATCTC CCCTGGCCGA TCCGCCCTTG CGGCCACTGC GTCTAATACC GCGTACCTTT GCGGTCGATC AACCATTTAT GGTACCGTTG CCAAAATTGC CTGACGGGTT GGCATGGGGG CGCTTGTACG GTGACGGTCA GAGTATTGTG CTCGGCTTTG ATCTGGCTAC ACCGGAATTG GTGAACTGGT CGGGATGGCG TGCGTTGTGG CAAGTGCTCT TGCCACCGTC ACAATTTGTC CCGCCCAATT TGGTATCTAT TGCCAAGCTC TATTCTACTT TTCTCGAAGA GAATCTGGCG AGTGCTTTGA TGAGCTTGCC GGCATTCGAT CTTCCTTCAC TCAATCTGAT CGTTATCTTG CTTGGTTGTT ATGTGGTGGT GGTCGGTCCG GTAACGTATC TGGTGTTGCG CCGGTTTGAT CGACTTGCCC TGGGGTGGGT AGTTGTTCCG GTGGTAACCC TCATATTTGC GGTGATTGCC TATAGTGTTG GTTACACTCT GCGTGGCGGC GATGTGATTA TTAGTCAACT GTCGCTTATC AATACCTACA CTGCACCGAT AGTACGTGAA CGAAGCTTCG TGGGTATCTT TTCACCTGAT CGGTCAACCT ATCGTTTGCG TTCAACGGAT GACGGTGTGC TGACGCGGCC CATTGGGGTC CAAGGACCGT GGAGTTCAGA AGTATTAGCG AATGGCCGTT ATCTACAAGG AATTTCTGAT ACGGTGGTAG AGGGTCTTGA GGTACCACAG TGGTCGTTGC AGGCCGTTGC AACCGATCGG GTCATTACCG CCGATGTCCT CGAGGCGCAG CTTGTCATTA ATGGTGATGA AGTACAGGGC GAGGTAGTGA ATCGAGGGGT GCGAACGCTT GAGGATGTGG TTGTTGTATA CGGAGATCTC ATCAGTCGTC TCGGTTCGCT TGCCCCCGGT GAGCGGCGGG TTAGTCGGCT TGAGCGTCCG GCCTACGCCT ACGATGGCAT CTCACTCAGC TACTTAATCT ACGGTGAGCA ATTTGATGCG ATGGCACGGA TGGCGCGACC GATGCCACCA GATTTGCAAC TGAAGAGTCG CGTGTTGGAT GCGCTGTATG GGTATGGTAC GGCGATTCGC GGCAAGCAAC CGCTCGTATT TGGGTGGTAC ACGACGCCGG AAACTACGAT CATGCCGGTA GATCGCCGTG CTACAAGACA GCAAATTGCA CTAGTGCATA GTATGGCTCG TCTACATCTG GAAACCGGAA AGGCAGTTAC GCTGGATGCG GGGAGCTTTA CAGGCATATT TGAACGCATC ACTAATACGA GTAGTCCGTG CTATTCGGGT AATGTTCTCG GCGCTGCTCC TAATGTGGAG CCGGTTGTAC TCCGTTTTAT GTTGCCCCGT GATCTGATCG GTCTCCGGCC AGATAGTATG ACGATGAACG TGCGTGCGGA CATGTTTTGG AGTGGGCAAA TCGAGGTGTA CGATTGGGTT GATGGTGTTT GGGTGCTGTT ACCTACCGAA CCCGTCTTTC AAATCAGTAG TGTTGAGATA CCGCAACCAG AACGGGTATT AGGCAGCCAT GGCGTCTTAC GGGTGCGGAT GCAGATTCGT GATCAAATGC AGGGGGTTAG CTGTGTCTAC CTCGATCCGA CTGTGCAAGG ACGATTACCA TGA
|
Protein sequence | MGAKQVWRWL SVLVMLTIVV VGQLAPVAAQ NTDVRLTVRP AFQGFFHPGT WLPVEVEVAN EGVDRTAEIV VGPTGGPFFS TTLDLPGGSR KGVTVYVYIY NQASRIQAQL LVNGTEVATA TAQVRSVGEG LLIGVVGTQQ PRLPAQLENG SRITTVPLTL GDIPADGLGL SPFDALIFTD VAADELRSDQ REAVRAWVLR GGTLVINGDS GLAHTLAILP DDVVPVTLDG FVSPLADPPL RPLRLIPRTF AVDQPFMVPL PKLPDGLAWG RLYGDGQSIV LGFDLATPEL VNWSGWRALW QVLLPPSQFV PPNLVSIAKL YSTFLEENLA SALMSLPAFD LPSLNLIVIL LGCYVVVVGP VTYLVLRRFD RLALGWVVVP VVTLIFAVIA YSVGYTLRGG DVIISQLSLI NTYTAPIVRE RSFVGIFSPD RSTYRLRSTD DGVLTRPIGV QGPWSSEVLA NGRYLQGISD TVVEGLEVPQ WSLQAVATDR VITADVLEAQ LVINGDEVQG EVVNRGVRTL EDVVVVYGDL ISRLGSLAPG ERRVSRLERP AYAYDGISLS YLIYGEQFDA MARMARPMPP DLQLKSRVLD ALYGYGTAIR GKQPLVFGWY TTPETTIMPV DRRATRQQIA LVHSMARLHL ETGKAVTLDA GSFTGIFERI TNTSSPCYSG NVLGAAPNVE PVVLRFMLPR DLIGLRPDSM TMNVRADMFW SGQIEVYDWV DGVWVLLPTE PVFQISSVEI PQPERVLGSH GVLRVRMQIR DQMQGVSCVY LDPTVQGRLP
|
| |