Gene Cagg_3229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3229 
Symbol 
ID7267376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3913410 
End bp3915752 
Gene Length2343 bp 
Protein Length780 aa 
Translation table11 
GC content53% 
IMG OID643568050 
Producthypothetical protein 
Protein accessionYP_002464523 
Protein GI219850090 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.101155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCAA AGCAGGTGTG GCGTTGGCTA TCGGTTCTCG TCATGCTCAC AATAGTGGTT 
GTCGGGCAGC TTGCACCGGT AGCTGCTCAG AACACCGACG TCAGGCTAAC AGTACGACCG
GCATTTCAGG GATTCTTCCA TCCCGGAACG TGGTTACCGG TCGAAGTTGA AGTGGCAAAT
GAGGGTGTCG ATCGAACAGC AGAGATTGTC GTAGGCCCGA CCGGTGGCCC TTTTTTTAGT
ACGACTCTCG ATCTTCCCGG TGGTAGCCGG AAAGGTGTTA CGGTTTACGT CTATATCTAT
AATCAAGCAT CCCGGATCCA GGCACAGTTG TTGGTGAACG GTACCGAAGT AGCAACTGCG
ACGGCTCAGG TGCGATCGGT CGGTGAAGGG TTATTGATTG GAGTAGTTGG TACGCAGCAG
CCGCGCTTAC CGGCCCAGTT GGAAAATGGG AGCCGAATTA CGACGGTGCC GTTAACATTG
GGTGATATTC CGGCCGATGG TCTTGGCCTG TCACCGTTCG ATGCTTTGAT CTTCACCGAT
GTTGCCGCAG ATGAACTGCG ATCTGATCAG CGTGAGGCAG TACGAGCATG GGTGTTGCGT
GGTGGGACTT TGGTGATCAA CGGTGATTCC GGCTTGGCCC ATACGCTCGC CATCTTGCCC
GATGATGTCG TTCCGGTAAC GCTCGACGGT TTCGTATCTC CCCTGGCCGA TCCGCCCTTG
CGGCCACTGC GTCTAATACC GCGTACCTTT GCGGTCGATC AACCATTTAT GGTACCGTTG
CCAAAATTGC CTGACGGGTT GGCATGGGGG CGCTTGTACG GTGACGGTCA GAGTATTGTG
CTCGGCTTTG ATCTGGCTAC ACCGGAATTG GTGAACTGGT CGGGATGGCG TGCGTTGTGG
CAAGTGCTCT TGCCACCGTC ACAATTTGTC CCGCCCAATT TGGTATCTAT TGCCAAGCTC
TATTCTACTT TTCTCGAAGA GAATCTGGCG AGTGCTTTGA TGAGCTTGCC GGCATTCGAT
CTTCCTTCAC TCAATCTGAT CGTTATCTTG CTTGGTTGTT ATGTGGTGGT GGTCGGTCCG
GTAACGTATC TGGTGTTGCG CCGGTTTGAT CGACTTGCCC TGGGGTGGGT AGTTGTTCCG
GTGGTAACCC TCATATTTGC GGTGATTGCC TATAGTGTTG GTTACACTCT GCGTGGCGGC
GATGTGATTA TTAGTCAACT GTCGCTTATC AATACCTACA CTGCACCGAT AGTACGTGAA
CGAAGCTTCG TGGGTATCTT TTCACCTGAT CGGTCAACCT ATCGTTTGCG TTCAACGGAT
GACGGTGTGC TGACGCGGCC CATTGGGGTC CAAGGACCGT GGAGTTCAGA AGTATTAGCG
AATGGCCGTT ATCTACAAGG AATTTCTGAT ACGGTGGTAG AGGGTCTTGA GGTACCACAG
TGGTCGTTGC AGGCCGTTGC AACCGATCGG GTCATTACCG CCGATGTCCT CGAGGCGCAG
CTTGTCATTA ATGGTGATGA AGTACAGGGC GAGGTAGTGA ATCGAGGGGT GCGAACGCTT
GAGGATGTGG TTGTTGTATA CGGAGATCTC ATCAGTCGTC TCGGTTCGCT TGCCCCCGGT
GAGCGGCGGG TTAGTCGGCT TGAGCGTCCG GCCTACGCCT ACGATGGCAT CTCACTCAGC
TACTTAATCT ACGGTGAGCA ATTTGATGCG ATGGCACGGA TGGCGCGACC GATGCCACCA
GATTTGCAAC TGAAGAGTCG CGTGTTGGAT GCGCTGTATG GGTATGGTAC GGCGATTCGC
GGCAAGCAAC CGCTCGTATT TGGGTGGTAC ACGACGCCGG AAACTACGAT CATGCCGGTA
GATCGCCGTG CTACAAGACA GCAAATTGCA CTAGTGCATA GTATGGCTCG TCTACATCTG
GAAACCGGAA AGGCAGTTAC GCTGGATGCG GGGAGCTTTA CAGGCATATT TGAACGCATC
ACTAATACGA GTAGTCCGTG CTATTCGGGT AATGTTCTCG GCGCTGCTCC TAATGTGGAG
CCGGTTGTAC TCCGTTTTAT GTTGCCCCGT GATCTGATCG GTCTCCGGCC AGATAGTATG
ACGATGAACG TGCGTGCGGA CATGTTTTGG AGTGGGCAAA TCGAGGTGTA CGATTGGGTT
GATGGTGTTT GGGTGCTGTT ACCTACCGAA CCCGTCTTTC AAATCAGTAG TGTTGAGATA
CCGCAACCAG AACGGGTATT AGGCAGCCAT GGCGTCTTAC GGGTGCGGAT GCAGATTCGT
GATCAAATGC AGGGGGTTAG CTGTGTCTAC CTCGATCCGA CTGTGCAAGG ACGATTACCA
TGA
 
Protein sequence
MGAKQVWRWL SVLVMLTIVV VGQLAPVAAQ NTDVRLTVRP AFQGFFHPGT WLPVEVEVAN 
EGVDRTAEIV VGPTGGPFFS TTLDLPGGSR KGVTVYVYIY NQASRIQAQL LVNGTEVATA
TAQVRSVGEG LLIGVVGTQQ PRLPAQLENG SRITTVPLTL GDIPADGLGL SPFDALIFTD
VAADELRSDQ REAVRAWVLR GGTLVINGDS GLAHTLAILP DDVVPVTLDG FVSPLADPPL
RPLRLIPRTF AVDQPFMVPL PKLPDGLAWG RLYGDGQSIV LGFDLATPEL VNWSGWRALW
QVLLPPSQFV PPNLVSIAKL YSTFLEENLA SALMSLPAFD LPSLNLIVIL LGCYVVVVGP
VTYLVLRRFD RLALGWVVVP VVTLIFAVIA YSVGYTLRGG DVIISQLSLI NTYTAPIVRE
RSFVGIFSPD RSTYRLRSTD DGVLTRPIGV QGPWSSEVLA NGRYLQGISD TVVEGLEVPQ
WSLQAVATDR VITADVLEAQ LVINGDEVQG EVVNRGVRTL EDVVVVYGDL ISRLGSLAPG
ERRVSRLERP AYAYDGISLS YLIYGEQFDA MARMARPMPP DLQLKSRVLD ALYGYGTAIR
GKQPLVFGWY TTPETTIMPV DRRATRQQIA LVHSMARLHL ETGKAVTLDA GSFTGIFERI
TNTSSPCYSG NVLGAAPNVE PVVLRFMLPR DLIGLRPDSM TMNVRADMFW SGQIEVYDWV
DGVWVLLPTE PVFQISSVEI PQPERVLGSH GVLRVRMQIR DQMQGVSCVY LDPTVQGRLP