Gene Cagg_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3218 
Symbol 
ID7267365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3902863 
End bp3903468 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content52% 
IMG OID643568039 
Productnon-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 
Protein accessionYP_002464512 
Protein GI219850079 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000142581 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0734009 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAT TGTTAATCGC TACCCACAAT CTGGGAAAAT TACGCGAGTT TGCTGCGATC 
TTTGCCGATC TCAACTTGCG GCTCTACTCC TTGAACGATC TCGGTATTAC TACTGTGATT
GAGGAGACCG GGCAGACATT TGCTGAGAAC GCACGGCTAA AGGCCGAGGG TTACCGAGCG
TTAAGTGGCT TACCGACACT CGCCGATGAT AGTGGACTAG AGGTAGCGGC ACTAGGTGGT
GCGCCGGGTG TCTATTCTTC CCGTTACGGT GGAGTAACAG GTGCAGCGCA GTTGCAGTAT
CTGCTCGATC AAATGCGTGA TATACCGTGG CACCAGCGTG TAGCACGTTT CGTCTGTGTG
ATCGCTATCG CTCATCCCGA TCATCCTACC GAGTTGGTCG AAGGTGTTCT CTCTGGAGTG
ATCGAGTTCG CTCCCCGGGG GATTGGTGGG TTTGGATATG ACCCTCTCTT TTATGTGCTC
GATGAAGATG CAACTTTAGC AGAGCTAAGT ATCGAACGAA AAAATCAGAT CAGTCATCGT
GCCCAAGCGG CCCGTGCTGC ACGTGAGATA TTGGCCCGTT GGCAAAGCAT GACCATCAAT
CCGTAG
 
Protein sequence
MRELLIATHN LGKLREFAAI FADLNLRLYS LNDLGITTVI EETGQTFAEN ARLKAEGYRA 
LSGLPTLADD SGLEVAALGG APGVYSSRYG GVTGAAQLQY LLDQMRDIPW HQRVARFVCV
IAIAHPDHPT ELVEGVLSGV IEFAPRGIGG FGYDPLFYVL DEDATLAELS IERKNQISHR
AQAARAAREI LARWQSMTIN P