Gene Cagg_3214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3214 
Symbol 
ID7267361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3898008 
End bp3899972 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content56% 
IMG OID643568035 
Producthypothetical protein 
Protein accessionYP_002464508 
Protein GI219850075 
COG category[S] Function unknown 
COG ID[COG5305] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.223784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.433781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGT ATCGTGTTGA TTGGGTTTGG CTGACGCCGG TACTCGGCGT CGTTTTTGTT 
GTATTGTATC TGACCACCCT CACCGGTGTC CATACATATG ATGCGCTTTC GTACATCCTC
GATGTTGACC GTAAGCCGTG GCCTGAATTG TTCCATCCTC ACCATCTCCT CTACGGTCCG
TTAGGGGCTA CGATTCGCGC CGTTGCCATC AGTTTGGGAT GGCAGGGCAG TGCCGAATGG
TGGCTGCAAG CGACCAATGC GCTGGCCGGT GCTGTCGGTG TGGTTGCAGT GTTCGTCCTC
TGTCGTGTCG TGACCGGTAC GACGGTACCG GCGTTGGCGG CAGCGCTAAG CGTTGGCTGG
AGCTATGCCT ATTGGTACTA CGCTGCCGAG GTTGAGGTCT ATACGCTTGC CACTGTGGCC
CTGATCGTTG CCTTGATCTT GTTGGTCCAA CTGGTACGGA CACCGCGATG GCAGACGGCA
TGCCGGCTGG GGCTGATCAA TGGGATTGCC GTATTGGCCC ACCAGACCAA CGTCTTATTA
GTCGTACCGG TGCTGTTAAC CATTGGATTA ACGGTTTCCG ATCGTCGTAC CCGCTTGCGT
CTTGCAGTTG CCTATCTGCT CCCATTGGTA CTCCTGGTCG GCGGGGCGTA CCTTTGGGTC
GCCTTTGGCG TGAGTGGTAT GCGCCGTTGG AATGATGTGT GGTTGTGGTT GACCGGCTAT
GCCCGCACCG GTTTCTGGGG AGGGGCGATT GATGTGTCTA AGCTGGCCGG CTTTGCCAGG
GGCTGGAGTG AGACGCTGGC GATACACGGT GGTGGTTGGG TGGGGTTGAT TGCCCTCGCC
GTGTTGCTGA TCGGTTGGCG GGGAATTGTT CGGCTATCCT TCCCGTTACT GGTCGGTGTT
ATGAGTTGGC TAGTGGTGTA TGGCCTGTTT TTTCTCTGGT GGGAACCGGA CAATATCGAG
TTCTGGATCG CTAGTTTACC ACCGCTGGCA GTTCTGTTGA GTGCAGCATT GGCCGTTGAT
CATCCGCTTG ATCGGCTGCA CACCGGTGGG GCTGGGGTTA TCGGCTTACT GATCGCAGTC
GTACTCTTGA GCCTGAATCT GCCGGCAATT AAAGAGCGTG GTGATCCGAC ACGCGATCTC
CAGCGTAGAA TTGCGGCATC TTTGGTTGAT GCCGGTAATC CCGGCGATCT GCTGATTGTT
CCCGATGGAG TGCTCGAACT GTATTTACCG CACTACTGGC AGCGTGATAC CGTTTACAGT
CTGAATCAAG CAATGACCGC CGGCGGTGGT GATTGGTCTG TTGCTTGTCA ACTTATTCGC
CGACGGATCG ACACAGCCCT GATAAGTGGT TACGCAGTAT TCATTGCCGA TGACGCGCGT
CTGCCGTTGC CGGCGCCACC CGGCCAGCCG CCTACTCCTG CCGAACGGTT CGGTTTGGCT
GCCGAAACGG TAGCAGCTTG TTACACGCCG TTCGAGACAA TGTTGCGTCC ATTGGTATTG
GCCGACGATC TTCCTACCTA TCGGATGATC CCAAGTGCAA CGGCTCTCGC TGTCGGTGAG
GGCTGGGATT TTCGTAACGG ACGTTGGGGA TGGCACGCTA CCGGAGTCAC GACTGAAACG
ATAACCGCAA CCGGTTGGCA GATGACACCG GCCATCGATC CAGCTTTGCT CAGTCCACCG
GTATCGTTCA CGCTTGACCG AGTGATAGCA CTGGAGGTTC GCATCGCCAC CACGACGACG
GCTCGTGATG CCCAGCTCTT CTTACTCGAT CCGGCAGGTC AGACGAGTGA AGAACTCTCG
GTGCGTTTTA CGCTTGATCG TGGGTCGGAA ATGGCAACGT ATCGGATAGA TTTGACAGGA
TTAGCAGAAC GGCTCGATCG GGTCGGTGGT TTGCGCTTCG ATCCGGTGGG TATTGGCGAT
GGTGGCACAC TTATCGTTGA GTCAATTCGG CTGATCTGGC GCTGA
 
Protein sequence
MKQYRVDWVW LTPVLGVVFV VLYLTTLTGV HTYDALSYIL DVDRKPWPEL FHPHHLLYGP 
LGATIRAVAI SLGWQGSAEW WLQATNALAG AVGVVAVFVL CRVVTGTTVP ALAAALSVGW
SYAYWYYAAE VEVYTLATVA LIVALILLVQ LVRTPRWQTA CRLGLINGIA VLAHQTNVLL
VVPVLLTIGL TVSDRRTRLR LAVAYLLPLV LLVGGAYLWV AFGVSGMRRW NDVWLWLTGY
ARTGFWGGAI DVSKLAGFAR GWSETLAIHG GGWVGLIALA VLLIGWRGIV RLSFPLLVGV
MSWLVVYGLF FLWWEPDNIE FWIASLPPLA VLLSAALAVD HPLDRLHTGG AGVIGLLIAV
VLLSLNLPAI KERGDPTRDL QRRIAASLVD AGNPGDLLIV PDGVLELYLP HYWQRDTVYS
LNQAMTAGGG DWSVACQLIR RRIDTALISG YAVFIADDAR LPLPAPPGQP PTPAERFGLA
AETVAACYTP FETMLRPLVL ADDLPTYRMI PSATALAVGE GWDFRNGRWG WHATGVTTET
ITATGWQMTP AIDPALLSPP VSFTLDRVIA LEVRIATTTT ARDAQLFLLD PAGQTSEELS
VRFTLDRGSE MATYRIDLTG LAERLDRVGG LRFDPVGIGD GGTLIVESIR LIWR