Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3214 |
Symbol | |
ID | 7267361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3898008 |
End bp | 3899972 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643568035 |
Product | hypothetical protein |
Protein accession | YP_002464508 |
Protein GI | 219850075 |
COG category | [S] Function unknown |
COG ID | [COG5305] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.223784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.433781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGT ATCGTGTTGA TTGGGTTTGG CTGACGCCGG TACTCGGCGT CGTTTTTGTT GTATTGTATC TGACCACCCT CACCGGTGTC CATACATATG ATGCGCTTTC GTACATCCTC GATGTTGACC GTAAGCCGTG GCCTGAATTG TTCCATCCTC ACCATCTCCT CTACGGTCCG TTAGGGGCTA CGATTCGCGC CGTTGCCATC AGTTTGGGAT GGCAGGGCAG TGCCGAATGG TGGCTGCAAG CGACCAATGC GCTGGCCGGT GCTGTCGGTG TGGTTGCAGT GTTCGTCCTC TGTCGTGTCG TGACCGGTAC GACGGTACCG GCGTTGGCGG CAGCGCTAAG CGTTGGCTGG AGCTATGCCT ATTGGTACTA CGCTGCCGAG GTTGAGGTCT ATACGCTTGC CACTGTGGCC CTGATCGTTG CCTTGATCTT GTTGGTCCAA CTGGTACGGA CACCGCGATG GCAGACGGCA TGCCGGCTGG GGCTGATCAA TGGGATTGCC GTATTGGCCC ACCAGACCAA CGTCTTATTA GTCGTACCGG TGCTGTTAAC CATTGGATTA ACGGTTTCCG ATCGTCGTAC CCGCTTGCGT CTTGCAGTTG CCTATCTGCT CCCATTGGTA CTCCTGGTCG GCGGGGCGTA CCTTTGGGTC GCCTTTGGCG TGAGTGGTAT GCGCCGTTGG AATGATGTGT GGTTGTGGTT GACCGGCTAT GCCCGCACCG GTTTCTGGGG AGGGGCGATT GATGTGTCTA AGCTGGCCGG CTTTGCCAGG GGCTGGAGTG AGACGCTGGC GATACACGGT GGTGGTTGGG TGGGGTTGAT TGCCCTCGCC GTGTTGCTGA TCGGTTGGCG GGGAATTGTT CGGCTATCCT TCCCGTTACT GGTCGGTGTT ATGAGTTGGC TAGTGGTGTA TGGCCTGTTT TTTCTCTGGT GGGAACCGGA CAATATCGAG TTCTGGATCG CTAGTTTACC ACCGCTGGCA GTTCTGTTGA GTGCAGCATT GGCCGTTGAT CATCCGCTTG ATCGGCTGCA CACCGGTGGG GCTGGGGTTA TCGGCTTACT GATCGCAGTC GTACTCTTGA GCCTGAATCT GCCGGCAATT AAAGAGCGTG GTGATCCGAC ACGCGATCTC CAGCGTAGAA TTGCGGCATC TTTGGTTGAT GCCGGTAATC CCGGCGATCT GCTGATTGTT CCCGATGGAG TGCTCGAACT GTATTTACCG CACTACTGGC AGCGTGATAC CGTTTACAGT CTGAATCAAG CAATGACCGC CGGCGGTGGT GATTGGTCTG TTGCTTGTCA ACTTATTCGC CGACGGATCG ACACAGCCCT GATAAGTGGT TACGCAGTAT TCATTGCCGA TGACGCGCGT CTGCCGTTGC CGGCGCCACC CGGCCAGCCG CCTACTCCTG CCGAACGGTT CGGTTTGGCT GCCGAAACGG TAGCAGCTTG TTACACGCCG TTCGAGACAA TGTTGCGTCC ATTGGTATTG GCCGACGATC TTCCTACCTA TCGGATGATC CCAAGTGCAA CGGCTCTCGC TGTCGGTGAG GGCTGGGATT TTCGTAACGG ACGTTGGGGA TGGCACGCTA CCGGAGTCAC GACTGAAACG ATAACCGCAA CCGGTTGGCA GATGACACCG GCCATCGATC CAGCTTTGCT CAGTCCACCG GTATCGTTCA CGCTTGACCG AGTGATAGCA CTGGAGGTTC GCATCGCCAC CACGACGACG GCTCGTGATG CCCAGCTCTT CTTACTCGAT CCGGCAGGTC AGACGAGTGA AGAACTCTCG GTGCGTTTTA CGCTTGATCG TGGGTCGGAA ATGGCAACGT ATCGGATAGA TTTGACAGGA TTAGCAGAAC GGCTCGATCG GGTCGGTGGT TTGCGCTTCG ATCCGGTGGG TATTGGCGAT GGTGGCACAC TTATCGTTGA GTCAATTCGG CTGATCTGGC GCTGA
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Protein sequence | MKQYRVDWVW LTPVLGVVFV VLYLTTLTGV HTYDALSYIL DVDRKPWPEL FHPHHLLYGP LGATIRAVAI SLGWQGSAEW WLQATNALAG AVGVVAVFVL CRVVTGTTVP ALAAALSVGW SYAYWYYAAE VEVYTLATVA LIVALILLVQ LVRTPRWQTA CRLGLINGIA VLAHQTNVLL VVPVLLTIGL TVSDRRTRLR LAVAYLLPLV LLVGGAYLWV AFGVSGMRRW NDVWLWLTGY ARTGFWGGAI DVSKLAGFAR GWSETLAIHG GGWVGLIALA VLLIGWRGIV RLSFPLLVGV MSWLVVYGLF FLWWEPDNIE FWIASLPPLA VLLSAALAVD HPLDRLHTGG AGVIGLLIAV VLLSLNLPAI KERGDPTRDL QRRIAASLVD AGNPGDLLIV PDGVLELYLP HYWQRDTVYS LNQAMTAGGG DWSVACQLIR RRIDTALISG YAVFIADDAR LPLPAPPGQP PTPAERFGLA AETVAACYTP FETMLRPLVL ADDLPTYRMI PSATALAVGE GWDFRNGRWG WHATGVTTET ITATGWQMTP AIDPALLSPP VSFTLDRVIA LEVRIATTTT ARDAQLFLLD PAGQTSEELS VRFTLDRGSE MATYRIDLTG LAERLDRVGG LRFDPVGIGD GGTLIVESIR LIWR
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