Gene Cagg_3213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3213 
Symbol 
ID7267360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3897635 
End bp3897991 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content55% 
IMG OID643568034 
Productprotein of unknown function DUF192 
Protein accessionYP_002464507 
Protein GI219850074 
COG category[S] Function unknown 
COG ID[COG1430] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.888479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.317826 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGGTAC GTGTTGTAAA CCAGACCCGG CGCGCTGTCC TCGCGTGGCA CTGCGAGGTG 
GCGCGTACCT TTTTCTCCCG TGGCCGCGGT TTGTTGGGGC GCACGTCATT ACCTGAAGGC
AGTGGTCTGT TGATCGAGCC GTGTAACAGT ATTCATATGC TGTTTATGCG TTTTCCGATC
GATGCGATCT TTGTTGACCG TCATGGCAAT GTGGTGGCAC TGTATCCATC ATTACCACCA
TGGCGCCTCT ACGCCGGTCA TCGCCATGCA CGGTATGTGC TCGAACTTCC GGTTGGTGTG
ATCGCGATAA CTCAGACGGT ACTCGGTGAT CAGATCGTTA TTCAGCCGGC AACATAG
 
Protein sequence
MKVRVVNQTR RAVLAWHCEV ARTFFSRGRG LLGRTSLPEG SGLLIEPCNS IHMLFMRFPI 
DAIFVDRHGN VVALYPSLPP WRLYAGHRHA RYVLELPVGV IAITQTVLGD QIVIQPAT