Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3210 |
Symbol | |
ID | 7267357 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3894270 |
End bp | 3895661 |
Gene Length | 1392 bp |
Protein Length | 463 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643568031 |
Product | type II secretion system protein E |
Protein accession | YP_002464504 |
Protein GI | 219850071 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.532215 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTAT TGAAACGAAT TGGTGGTGCA ACTCCTCCGC CGGTAGAACC GACGGTGTCG CGGTCGCCGG TGCGCCCCGA AACCGGACGT ATAGCACCGG TTGGTGTGCC GAATACGGAA GATACGTTCC GAGAGCTACG TGCTCGTGTG CAGGATCGCC TCATCAACGA GCTAAACTCG CAGATTGATT TGAATAATCA GGCGAAAGTG CGCAAGCAGG TCGAAGAGAT CTTTAACTCG ATCCTCGATA GTGAAAGTAT TGTGCTCTCG CGGGCTGAGC GCCAACGCCT TTTCGAGAGT ATTACCGCCG ATATTATCGG TTTGGGGCCG CTCGAGCCAT TGCTGGCCGA TGATGATGTA AGCGAGATCA TGGTCAACGG GCCAAAGCAG GTCTATATTG AAAAGAAAGG TAAGTTGATC AAAACCGACA TCACGTTTGC CGATGACGAT CACGTGATGC GGATTATCGA CCGCATTGTG GCTCCGTTGG GCCGCCGCGT TGATGAATCA TCGCCAATGG TTGATGCCCG TCTCAAAGAC GGTTCGCGGG TGAATGTGGT AATCCGTCCG TTGGCATTGA ATGGACCGAC AATTACTATC CGCAAGTTCC GCAAAGACAA ACTCACCGTA CAAGATTTGG TGCGCTTTGG CTCGATGTCG CAAGATATGG CTGATTTTCT TGCCGCTTGT GTTCAAGCGC GCCTCAATAT TGTGGTTGCC GGCGGTACCG GTTCCGGTAA GACCACCCTA TTGAACGTAC TGTCGTCGTT CATCCCGGAA GATGAGCGGA TTATTACCGT CGAAAATGCT GCCGAATTGC AGCTTCGCCA AGAGCATGTG GTGACCCTCG AATCACGTCC GCCAAACGTG GAAGGTAAGG GTGAAGTTAC CATCCGTGAT CTAGTCATCA ACTGTCTGCG TATGCGTCCT GAGCGGATTA TTGTCGGTGA GTGTCGCGGC GGTGAGACCC TCGACATGTT GCAGGCAATG AACACCGGTC ACGATGGCTC GATGACGACG ATCCACGCGA ATTCGCCACG TGATGCAGTG AGCCGTATCG AGACTATGTG CTTAATGGCC GGTATGGATC TCCCTGCACG CGCCATTCGT GAGCAGATCG CGTCGGCTAT TCATGTGTTC GTCCAACAAT CGCGCCTGAA AGATGGTTCA CGTAAGGTGA CCCAGATTAC CGAAGTCGCC GGTATGGAAG GTGATGTGGT TGTTCTCCAA GATATTTTCG TCTTTGAGCA GACGGGTATT GATGAGAAAG GCAAGATTGT TGGTCATCTG CGCCCGACCG GTGTTCGACC ACGCTTCCTC GAGAAGTTTG AAGCGCTTAA TATCTTCTTG CCGCCAACCA TTTTCGGTGC GTCGGAACGC TTCAGCTTCT AA
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Protein sequence | MSLLKRIGGA TPPPVEPTVS RSPVRPETGR IAPVGVPNTE DTFRELRARV QDRLINELNS QIDLNNQAKV RKQVEEIFNS ILDSESIVLS RAERQRLFES ITADIIGLGP LEPLLADDDV SEIMVNGPKQ VYIEKKGKLI KTDITFADDD HVMRIIDRIV APLGRRVDES SPMVDARLKD GSRVNVVIRP LALNGPTITI RKFRKDKLTV QDLVRFGSMS QDMADFLAAC VQARLNIVVA GGTGSGKTTL LNVLSSFIPE DERIITVENA AELQLRQEHV VTLESRPPNV EGKGEVTIRD LVINCLRMRP ERIIVGECRG GETLDMLQAM NTGHDGSMTT IHANSPRDAV SRIETMCLMA GMDLPARAIR EQIASAIHVF VQQSRLKDGS RKVTQITEVA GMEGDVVVLQ DIFVFEQTGI DEKGKIVGHL RPTGVRPRFL EKFEALNIFL PPTIFGASER FSF
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