Gene Cagg_3201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3201 
SymbolrecR 
ID7267348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3885608 
End bp3886225 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content56% 
IMG OID643568022 
Productrecombination protein RecR 
Protein accessionYP_002464495 
Protein GI219850062 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000136854 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.489368 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTC ACCCAGATCA TTATCTGATC GCCGCTCCGG TAGCCCGCTT GATCGAGGAG 
TTTGCCAGGC TGCCCGGTAT TGGCCCGAAG ACAGCCTCTC GTCTCACGTT TTATCTGTTG
CGTGCCGAAC CAAAGCAAGC CCAAGCGCTT GCCCAGGCAA TCCTCGATGT CAAAGCGCAG
GTGGGTTATT GCCGACGTTG TTTCAATATT ACGGTCGATG AGCTGTGCCC AATCTGCCGC
GACCCCTCAC GCGATCAGAC CAAAATCTGC GTGGTCGAAG AGCCACTCGA TGTACTCGCT
ATTGAACGTA CCGGTGCCTA CCGTGGTCTC TACCACGTGT TACACGGTCA TATCGCTCCC
CTCGAAGGTA TCTACCGCGA GGATCTGAAA ATCGATGAAC TCATTGCTCG TGTGCGCAGT
GAACCGGTGA ATGAAGTCAT CCTTGCTACG AATCCCAATA CTGAAGGGGA AGCAACGGCG
TTCCTGTTGC TCCGCGATTT AGCACCGCTT GGGGTACGAG TAACGCGCCC GGCCCGCGGT
TTGCCAACCG GTGGTGATTT AGAGTGGGCC GATCCTGAAA CCCTCGGGTC AGCATTAGAG
GGCAGACGGG AATTGTGA
 
Protein sequence
MTVHPDHYLI AAPVARLIEE FARLPGIGPK TASRLTFYLL RAEPKQAQAL AQAILDVKAQ 
VGYCRRCFNI TVDELCPICR DPSRDQTKIC VVEEPLDVLA IERTGAYRGL YHVLHGHIAP
LEGIYREDLK IDELIARVRS EPVNEVILAT NPNTEGEATA FLLLRDLAPL GVRVTRPARG
LPTGGDLEWA DPETLGSALE GRREL