Gene Cagg_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3199 
Symbol 
ID7267346 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3883270 
End bp3885111 
Gene Length1842 bp 
Protein Length613 aa 
Translation table11 
GC content60% 
IMG OID643568020 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionYP_002464493 
Protein GI219850060 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000104981 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.61313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTTC AATCACTCTA CCGCAAATGG CGTTCCCAGA CCTTTGCCGA GCTGGTAGGG 
CAAGAGCATG TGGTGCAGAC CCTGCGCAAT GCAATTGCCG AAGACCGGGT CGGTCATGCC
TATCTGTTCA CCGGTCCGCG CGGTGTTGGG AAGACGACAA TGGCGCGGTT ATTGGCGAAG
GCGGTGAACT GTCTCCATCC CGATCCCTCG GCTCGTCCGT GCGGTACCTG CGAGATGTGT
ACCGCTATCG CCGAGGGTCG TGCCGTTGAT GTGATTGAAA TGGATGCTGC CTCGCATACC
AGTGTTGAAG ACGCCCGTGA GATTATCGAG CGGGTGCAGT TCCGCCCCAG CGTTGCGCGC
ATGAAGGTCT ATATTATTGA CGAGGCCCAC ATGCTCTCGA CGGCAGCGTT TAATGCCCTG
CTCAAGACAT TGGAAGAGCC GCCCGATCAC GCCCTGTTTA TTCTCGCGAC GACCGAAGTG
CATAAGGTGC CGGCGACAAT TTTGTCGCGG TGTCAACGAT TTACCTTCGT GCGCCATAGT
GTAACTTCGA TGGCGGCCCA CGTGCGCCGG ATTGCTGCTG CCGAAGGTAT TGTGCTCGTC
GAAGGGGCGC CGGAAGCGAT TGCCCGTGCT GCGACCGGGA GTATGCGCGA TGCGCTCGGT
ATTCTCGAAC AGTTAGCCTC GTTCGTTGAA GGGCCGATCA CGCTTCAGCA TGTGCAAAGC
TTGCTCGGTA TGACCGCTGC GGCTGAGGTT GATGCGCTGA TTGAGGCTCT GCTCTCTGCC
GATCTGACCG CTGCGCTGCG TGCAGTGAAT GCTGTGGCGA ATCAGGGTGC CGATCTGCGC
CAGTTCGCCC GCGATGTGGT AGAACGGCTG CGTGCCGTGA TGTTGCTCAA CGCGACCGGT
GACCGCACGC TGCTCGATCT TGGTGATGAT GAGGTGGCGC AGTTGATGCA ATGGGCACAG
CGGGCCGAAA TGGCGGCATT GGTGCAGTGG GTGAAACTGT TTAGCGGCCT CGATTATCAG
TTGCGTACCA CTCCCTATGG TCATCTCCCC CTCGAAGTGG CGGTCGTCGA GGCGCTAGTA
GCTCCGGTTC CCGTCGTCCA ACCGGTCACG CCGCATCCAC ACGCAGTTCG TCCCCAATCG
CGTCCGTCGG TGCCTGCTTC GCCCACTACC TCGTCGGCAC GCCCAAACAT CGATCAGAGC
ATGGCATTTA CGGTTGCTCC CGCTCTCACG CAACCATCGG CGCCGGTCAA ACCGAGCCGC
GCAACGCCTC CGCCGTCCAC CGAGCCGCCA ACCTCCTCTC CACTGCCCGC AACACCGCCG
GTTGCGCCGC CAACCACGCC CGAATCAGGA GTGGCGCCCA CTGCCGATCC GCCGCCCCCG
CCGCCGGCAG TATGGGCGGC AGTGCAGCAG AGTCGCCCAC CGGTTGATTA TCCTGCGGCT
CGTGCTGCCG ATGCCGAGCT GTCGCTCCTC GAACGCCTCG AAGCGACGTG GGAAGACTTC
AAGCGCGATG TGCGCCCGCG TAGTCCTACC GTACAGGCTC TGCTCAACAG TGCGCGACCC
TACGATGTCG AGGGGAATAC CATCATTTTG CTCGTCACCT CGACCTTCCA TAAAGAGCGG
CTAGAAGAGC CGAAAAATCG CGCCATTATC GAAGAAGTTC TGCGTCGTCG GTTTGGTAAA
ACGTATGCAG TGCGCTGTAC GATCGAAGAG AAGTCGACTG AGCCGATCGA TCTGCGCGCT
AAAATTCGTG AAGCACGCAA AGATGAATTG GTGCGCGCTG CACTCAATAT TTTCGATGCC
CATATTGTCG GTATTGAGCC ACTGGAGCAA GAACCGGAAT AA
 
Protein sequence
MAVQSLYRKW RSQTFAELVG QEHVVQTLRN AIAEDRVGHA YLFTGPRGVG KTTMARLLAK 
AVNCLHPDPS ARPCGTCEMC TAIAEGRAVD VIEMDAASHT SVEDAREIIE RVQFRPSVAR
MKVYIIDEAH MLSTAAFNAL LKTLEEPPDH ALFILATTEV HKVPATILSR CQRFTFVRHS
VTSMAAHVRR IAAAEGIVLV EGAPEAIARA ATGSMRDALG ILEQLASFVE GPITLQHVQS
LLGMTAAAEV DALIEALLSA DLTAALRAVN AVANQGADLR QFARDVVERL RAVMLLNATG
DRTLLDLGDD EVAQLMQWAQ RAEMAALVQW VKLFSGLDYQ LRTTPYGHLP LEVAVVEALV
APVPVVQPVT PHPHAVRPQS RPSVPASPTT SSARPNIDQS MAFTVAPALT QPSAPVKPSR
ATPPPSTEPP TSSPLPATPP VAPPTTPESG VAPTADPPPP PPAVWAAVQQ SRPPVDYPAA
RAADAELSLL ERLEATWEDF KRDVRPRSPT VQALLNSARP YDVEGNTIIL LVTSTFHKER
LEEPKNRAII EEVLRRRFGK TYAVRCTIEE KSTEPIDLRA KIREARKDEL VRAALNIFDA
HIVGIEPLEQ EPE