| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3178 |
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| Symbol | prfA |
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| ID | 7269927 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3856520 |
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| End bp | 3857605 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643567999 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_002464472 |
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| Protein GI | 219850039 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000107568 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.412764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTGATA AGCTTGAAGC TGTTGCGCAG CGCTACGATG AATTGACTCA GCTTATGGCT
CAGCCCGAGG TGGCAACCAA TGTCACCCTC TTGCAGCAGT ATGCGCGTGA ACAGCGTGAA
TTAGAAGATA TTGTTACTAC CTACCGCGAA TACCAGGCGG CCCAGCGTGC CATTGCTGAG
GCCGAGGCGA TGCTCGATGA GAACGATCCC GAATTGCGCG CTTTGGCGCA AGAGGAACTC
GATACCCAAC GTAAGCGGCT TGCTACCCTC GAAGAGCAAT TGAAAGTACT CTTGTTGCCA
CGCGACCCCA ACGACTCGAA AGATGTCATT ATGGAAATTC GGCAGGGTGA AGGTGGTGAC
GAAGCCGCTT TGTTTGCCGC CGACCTCTTC CGCATGTACA CCCGCTTCGC CGAGTCGCGA
GGATGGAAGG TAGAAGTCGA TAGTCTTACC GAAAATGGTA TTGGCGGCAT TAAAGAAGTC
ATTTTTCAGA TTCACGGTGA AGGTGCGTAC AGTCAGTTGA AATACGAGGG TGGAGTACAT
CGCGTGCAAC GAGTACCGGC AACCGAAGCA CGTGGGCGCA TCCATACATC AACCGCGACC
GTCGCTGTGT TGCCGGAGGT CGAAGAGACC GAGATCGAGA TCAAACCCGA AGACTTACGT
ATCGATGTCT TTCGCAGTGC CGGCCACGGT GGGCAAGGCG TGAATACGAC CGACTCGGCT
GTGCGGATCG TGTACAAGCC CGGTACCCCG GAAGAGATAG TCGTCACCTG CCAGGATGGC
CGTTCGCAGA TTCAGAACCG TGAACGAGCT ATGACCGTCT TGCGCGCTCG GCTCTATGCG
CGTGAACAAG AGAAGCGCCA ACGCGAAATC GGTGCCTCAC GGCTGGCTCA AGTCGGCAGT
GGGGAGCGCG CTGAAAAAAT CCGCACCTAC AACTTCCCCC AAGATCGCAT TACCGATCAT
CGCATCGGTC AAAACTTCTC AAACTTGCCG GCAGTACTCG ACGGCGAACT CGATAAGATC
ATCGAGGCTC TAATTGTGTA CGATACTGCC GAACGGCTGC GAGCGAGCGG CATCAGCAAC
AATTAA
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| Protein sequence | MFDKLEAVAQ RYDELTQLMA QPEVATNVTL LQQYAREQRE LEDIVTTYRE YQAAQRAIAE
AEAMLDENDP ELRALAQEEL DTQRKRLATL EEQLKVLLLP RDPNDSKDVI MEIRQGEGGD
EAALFAADLF RMYTRFAESR GWKVEVDSLT ENGIGGIKEV IFQIHGEGAY SQLKYEGGVH
RVQRVPATEA RGRIHTSTAT VAVLPEVEET EIEIKPEDLR IDVFRSAGHG GQGVNTTDSA
VRIVYKPGTP EEIVVTCQDG RSQIQNRERA MTVLRARLYA REQEKRQREI GASRLAQVGS
GERAEKIRTY NFPQDRITDH RIGQNFSNLP AVLDGELDKI IEALIVYDTA ERLRASGISN
N
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