Gene Cagg_3176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3176 
Symbol 
ID7269925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3853678 
End bp3855231 
Gene Length1554 bp 
Protein Length517 aa 
Translation table11 
GC content55% 
IMG OID643567997 
ProductABC transporter related 
Protein accessionYP_002464470 
Protein GI219850037 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111078 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.67189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACAGA ACGGCCAGGA ACGACCAGTT GTACTGGAAG CTCGGGGGAT TACCAAACGC 
TTTCCCGGTG TCATCGCTAA TGATAATGTG TCGCTGAAGC TACACAAGGG CGAGGTATTG
GCCTTGCTCG GCGAAAACGG CGCCGGTAAA TCAACGCTCA TGAATATTCT GTACGGGCTG
TACCATCAAG ACGAAGGCGA AATCTTTGTC AAGGGTGAAC CGATCCGGAT CAGTAATCCG
CATGAATCGA TTGCCCGTGG GATCGGAATG GTACACCAGC ACTTCCAATT GGTACCGGTG
ATGACCGTAA CCGAAAACAT CATCCTCGGG AACGAAGTCA CTAACGGCCC GTTCCTTAAC
CGCAAACAGG CTGCTGAACG CATTCGGACT ATCTCCGCCC AGTATGGCCT CCCCGTTGAC
CCTGATGCTT TAGTTGCCGA TCTTGATGTC GGGGCACAGC AGCGCGTTGA GATTATCAAG
GCGCTTTATC GAAACGCCGA TATTCTCATT CTCGATGAGC CAACTGCGGT GCTGACGCCG
CAAGAGGCTG ACGATCTCGT GCGGGTTATG CGCACACTGA CGGCTCAAGG CGCTTCGATC
ATCTTTATTA CGCACAAGTT GCGTGAAGTT CTTGAGGTTG CCGACCGGAT TATCGTGCTG
CGTAATGGGA AAGTGGTCGG TGAAACGACC CCGGCGCAGG CGACTGAAGC GAGTCTGGCC
GCGATGATGG TCGGACGCGA CGTTATTTTA AAAGTCGAGA AGCAGCCGGC TCACCCCGGC
GAGCCGGTTC TCGAAGTCCG TGACTTGCAT GTGCGTGATG ACCGTCGTTT GTTGGCGGTA
CGTGGAGTCA ATCTCGAAGT ACGCGCAGGT GAGATTCTCG GAATCGCCGG CGTACAGGGC
AACGGCCAAA CCGAACTGGT TGCGGCACTC ACCGGTCTGC GGCCAATTGA AGCCGGCACC
GTTCGGATTG CCGGTGTTGA TGTGACCAAC GCTACACCAC GTAAGATTAG CGAGTTAGGT
GTGGCCCATA TTCCCGAAGA TCGTCAGCGC GATGGGTTAG TGACCTCGTA CCCGCTGACC
GATAACTCAG TTCTGGAATT GTACTATTTG CCGCCGTTTG CCAACGGGAT TGTGCGCAAC
GATCAGGCTA TTAACGAGCA TTGCACACGC TTGGTTGTCG AGTTCGATGT GCGCACCCCG
AGCATCAACG TACCGGCTAG TTCACTAAGC GGTGGTAACC AGCAGAAGCT GATTGTGGCC
CGCGAGTTTA CCCGTCCGCT GAAATTGCTG ATCGCGGCTC AACCAACCCG TGGGATTGAC
GTCGGTTCGA TAGAGTTTAT CCATAATCAG ATCGTGAAAA AGCGTGATGA GGGTGTCGCC
GTCTTACTGG TATCTGCCGA ACTCGATGAG ATTTTGTCAC TGGCCGACCG CATTGCCGTC
ATGTATCACG GCCAGATCGT CGCAACGGTG AAAAACGGCG AACTCTCACG CGAAGAACTT
GGTCTGTTGA TGGCCGGTGC GACACTCGAT CGCTCGCAAC CGGTTGTTGC CTAA
 
Protein sequence
MTQNGQERPV VLEARGITKR FPGVIANDNV SLKLHKGEVL ALLGENGAGK STLMNILYGL 
YHQDEGEIFV KGEPIRISNP HESIARGIGM VHQHFQLVPV MTVTENIILG NEVTNGPFLN
RKQAAERIRT ISAQYGLPVD PDALVADLDV GAQQRVEIIK ALYRNADILI LDEPTAVLTP
QEADDLVRVM RTLTAQGASI IFITHKLREV LEVADRIIVL RNGKVVGETT PAQATEASLA
AMMVGRDVIL KVEKQPAHPG EPVLEVRDLH VRDDRRLLAV RGVNLEVRAG EILGIAGVQG
NGQTELVAAL TGLRPIEAGT VRIAGVDVTN ATPRKISELG VAHIPEDRQR DGLVTSYPLT
DNSVLELYYL PPFANGIVRN DQAINEHCTR LVVEFDVRTP SINVPASSLS GGNQQKLIVA
REFTRPLKLL IAAQPTRGID VGSIEFIHNQ IVKKRDEGVA VLLVSAELDE ILSLADRIAV
MYHGQIVATV KNGELSREEL GLLMAGATLD RSQPVVA