Gene Cagg_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3163 
Symbol 
ID7269912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3842322 
End bp3843080 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID643567984 
Producttranslation initiation factor IF-3 
Protein accessionYP_002464457 
Protein GI219850024 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0170352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATCAGAGACC GGTTTCGCAT CAACAATCGC ATTCGCGCCC GTGAAGTCCG CCTGATCGAC 
GAGAACGGTA CGCAGGTCGG CATCGTACCC TTACGCGAGG CGCTGGCAAT GGCTGAGGAG
CGGGGGTACG ACCTCGTTGA GGTTGCACCC AATGCGGTTC CGCCGGTATG TCGTCTGCTC
GATTATGGTA AGTTTCGTTA CGAGCAGAGC AAGAAGGAGC GTGAAGCGCG CCGTAATCAG
AAACAGTCGG AACTCAAGCA GATCCGGCTG ATGCCCAAAA CCGATGATCA CGATGTCGCT
GTCAAGGCGA ATCAAGCGCG ACGCTTTTTG TTGGCCGGCG ATAAAGTGAA GTTTAACCTG
CGCTTCCGTG GCCGCGAAGT GGCCCACCCA GAAATCGGGC GCAAGATGCT CGATGAGATT
GCCGAACAGT TAAGTGATAT TGCCATCATC GAGCAAAAAC CGCTGATGGA AGGCCGCGTG
CTTTCGATGT TGCTAGCACC GAACGCGAAG GTGCTGAAAG CAGCTCAGCA GGCCCAAAAG
GCTGCTGCCC AGCGCCAGGC TGCGGCAACT AGTGCTGCAC CTGCTCAAAC CAGCAGCCCA
ACATCTGACA CGCCACCTCC TGATGAGGAC GTTGAGGAAG ATGAAGAAGC AGAAGGCCTT
ATCGATGAAG ATTACGACGA AGACGACGAG ATCATCGATG AGGAGTACGA CGCAGATGAG
GACGACGAGG ACGATGAGTA CGAGCGGCGG CGACGGTAA
 
Protein sequence
MRDRFRINNR IRAREVRLID ENGTQVGIVP LREALAMAEE RGYDLVEVAP NAVPPVCRLL 
DYGKFRYEQS KKEREARRNQ KQSELKQIRL MPKTDDHDVA VKANQARRFL LAGDKVKFNL
RFRGREVAHP EIGRKMLDEI AEQLSDIAII EQKPLMEGRV LSMLLAPNAK VLKAAQQAQK
AAAQRQAAAT SAAPAQTSSP TSDTPPPDED VEEDEEAEGL IDEDYDEDDE IIDEEYDADE
DDEDDEYERR RR