Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3163 |
Symbol | |
ID | 7269912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3842322 |
End bp | 3843080 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643567984 |
Product | translation initiation factor IF-3 |
Protein accession | YP_002464457 |
Protein GI | 219850024 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0170352 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATCAGAGACC GGTTTCGCAT CAACAATCGC ATTCGCGCCC GTGAAGTCCG CCTGATCGAC GAGAACGGTA CGCAGGTCGG CATCGTACCC TTACGCGAGG CGCTGGCAAT GGCTGAGGAG CGGGGGTACG ACCTCGTTGA GGTTGCACCC AATGCGGTTC CGCCGGTATG TCGTCTGCTC GATTATGGTA AGTTTCGTTA CGAGCAGAGC AAGAAGGAGC GTGAAGCGCG CCGTAATCAG AAACAGTCGG AACTCAAGCA GATCCGGCTG ATGCCCAAAA CCGATGATCA CGATGTCGCT GTCAAGGCGA ATCAAGCGCG ACGCTTTTTG TTGGCCGGCG ATAAAGTGAA GTTTAACCTG CGCTTCCGTG GCCGCGAAGT GGCCCACCCA GAAATCGGGC GCAAGATGCT CGATGAGATT GCCGAACAGT TAAGTGATAT TGCCATCATC GAGCAAAAAC CGCTGATGGA AGGCCGCGTG CTTTCGATGT TGCTAGCACC GAACGCGAAG GTGCTGAAAG CAGCTCAGCA GGCCCAAAAG GCTGCTGCCC AGCGCCAGGC TGCGGCAACT AGTGCTGCAC CTGCTCAAAC CAGCAGCCCA ACATCTGACA CGCCACCTCC TGATGAGGAC GTTGAGGAAG ATGAAGAAGC AGAAGGCCTT ATCGATGAAG ATTACGACGA AGACGACGAG ATCATCGATG AGGAGTACGA CGCAGATGAG GACGACGAGG ACGATGAGTA CGAGCGGCGG CGACGGTAA
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Protein sequence | MRDRFRINNR IRAREVRLID ENGTQVGIVP LREALAMAEE RGYDLVEVAP NAVPPVCRLL DYGKFRYEQS KKEREARRNQ KQSELKQIRL MPKTDDHDVA VKANQARRFL LAGDKVKFNL RFRGREVAHP EIGRKMLDEI AEQLSDIAII EQKPLMEGRV LSMLLAPNAK VLKAAQQAQK AAAQRQAAAT SAAPAQTSSP TSDTPPPDED VEEDEEAEGL IDEDYDEDDE IIDEEYDADE DDEDDEYERR RR
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