Gene Cagg_3153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3153 
Symbol 
ID7269902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3830955 
End bp3834671 
Gene Length3717 bp 
Protein Length1238 aa 
Translation table11 
GC content54% 
IMG OID643567974 
Producthypothetical protein 
Protein accessionYP_002464447 
Protein GI219850014 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGGC GCAGAGTATG GTGGATTGCG ATCCTTCTGT TCATCGCAAG TATACTGCTA 
TGGCCCAAAG TGAGTCTGGG TCAATCAGCA GTGACCGAGT TTTTTGTCGA TACCCTGGCC
GACACAGCAG TTACGGATCT GAATAACCAT TGTATCGACT CGCTCGCTAA CAACAATTGT
AGTCTGCGCC AAGCCATCGC CAAAGCAAAC GCCACTTCCG GGACAAACCC GATCAGTATC
AACTTCAACT TGATCACCGA AGGTACTGTA GGTACCCCTC CTTACGTCAT TACGCTAACC
GAACGACTGC CTCCGCTGAC CCGACCAAAC GTGGTGATTA GCGCCGATCT ATCGTTTGGC
ACTCCACTGA TTGCTATTAA TGCCAACGGC GCCGATGCGG GTTTGGTGCT GAACGGTGGT
AATGCCACGA TTGAAGGATT GGTCATCTAT GGTGCTAGTA GCGATACCGG AAGCTATCGT
GGCAGTGGGA TTTATATCAG CAGCGCCGGT AATACGGTGC GGAATTGCAT TATTGGGCTA
CAGCTCGATG GAACAGTGCC ACCCGATGCC CAGCGAAATC GCAACGGCAT CGTGATCATT
GGCAGTGCGG CCCGTAATAA TCAGATTGGT GATGTAACCA AACCGAATAC GATTGCCGGT
AATATCGCGA ATGGGATTGT CATCACAAAC GCTTCACAAA ACACGATCAA GGCCAATCGG
ATCGGTGTGC TGTTCACAAC CTCAACCGTC GCTCGATCTA ACGGTGGGTA CGGTATTCAG
ATTCTGAGCG ACCTTACCAT CGATCCTAAT GCCCGAACTG AACTCAACAT CGTCGGCGGT
GCCACAAATG CTGAACGCAA TATCATCGGT GCGAATTCAT TGAGCGGTAT TCTTATCGGC
GGCACACAGA CTTATACGAC AACCATCAGT AGTAACCTTA TCGGCGTAAA TCTCGACGGT
GAACCGGCGT TTGGTAACGG CGGCGATGGT ATTCGGGTCG AAGATGGCGC CCAAGGAACG
ATGATCGGCA GCCCTAACGT CACCCAACCG CTCGTGATCA GCGGTAACAA CGGGTATGGA
ATACACGTGC GGAGTGGTGG TGGGGCGGCA CCGGTGCAAA CGATGATCAA TGGGTATACA
GTGATTGGGC TGAGTCGGAG CCGAACGAGC ACCCGCCCGA ACGGCCAGGG TGGGATCCGA
TTTAGCGAAA GCACCGGCAC GGCAACAATC GGTAGTGATA ACGGAGATGT GCAGATCGGT
GGTAATGGTG GACCAGGTAT CTGGCTCGGT AACGGGGTTG CTAACGCCAC CATCACGCGC
GCGTTTGTCG GCGTTCTCCC CAACGGCACA ACAACTTTTG TCAATAATGG CGGTATCCGG
TTTGATGGTG TTGCTGAAGT GACAATGACC AGATCGGTCA TTGCTGCCAA CACCGATTAT
GATGTTCACA TCAACAATGT GGGCCGGGTA ACGCTCGACA ATAATATCAT CGGCCTCAGT
GCCGATGGCC GTACTGCACT CGGTAGCGCG AGCGCCGGGA TTACGGTAGT CAATAGCGCC
AACGTAACCA TCGGTGATAG TAGTGGAAAT GTGATTGCGG CAACCAATGG TCCTGGGATC
GAGATTGGTG GCACGACTAA TCTAACCATT ACTATTCGTG CTAATACCTT CGGGCTGCGC
CGCGATACAA CCGGTGATGC GTTTAGCGTT GCTGCCCCAA ACAACGGCCC TGCAATTAGA
GTTGGGAACA GCGCACAGAT AACCATTGCC AACAATCTGA TCGCCGGTGA TGGTAGCAAT
ACCGGTATTG AACTACATAA TGTCGAGCAG GTAACCGTTC AGCAGAATCA AATCGGCTGG
ATCGCCGATC CGAACGGTGG GTCGAATCCG CTCCCTCGTC CGGCCAGGAT TGGCATTGCC
CTCACCAACG TGACAACGGC TACCCTCGCT GCCAATCAAA TCCGCCTCAA CACAGACGAT
GGGATTCAAC TGACGCATTC ATCTGCCGTC ACCATCAACA ATAATAATGT CATTGAGCAG
AACAACGGAG ATGGAGTTCA AGTTGGCGGT ACGAGCCTCG GTGTTACCAT CACGACCAAT
CGATTACGCG CTAACACCGG TTACGGCGTC CGCGTTACCG ACAACGCCCG CCGCGTCAGT
ATTACACAAA ATCAGATGAC GGCCAATACG CTGGGCGGGA TCGCATTGGT CAATACAACG
TTGTACAACG GCACACTACC TGATCCTGAT CAAAACCTCG ACCGGCCAAA CCATAGCATC
GATCCGCCGT TTAACCTCCA GCTCTTCCAA GACGGTGGTG TGAGTGGGAA TGTCTTTACC
AGTACTGCCG AACAGGAAGC AAATCTCGAG CCGGTATCGG CATGTGTTGG TTGTTCCATC
CAAATTTACA GCACCGATCC CGATCTACCG ACACCGGACG AGCAAGGTTG GCAGCAACTC
GCTAATGTCA GTGTGAATGG GGTCGGTGCA TTCAGCACAC TTCTTAGTCC GCCACCACAG
AGCTATCGTC AACTCGTCTT CGCGGCTACC GACCAATTCG GTAATACTTC GGTATTCCGT
TCCTTCACAC CGGTCTTTGA TCTACGACTG ATTCCAATCG ATCCGATTGA ACAGAGTGCT
GCCCCCGGTA GCACCATCAA CTACCGACTA CGGATCGAAA ACCACGGAAA CCTTGGCGTT
AATCGGATCC GGCTTACCAC AACCGGAACC CTCAGCGGGT GGACAGCGAC CGTCGCGCCG
AGCGAACGTT TCACGCTGTT GCCCGGAACC GGCCAGCTCC TTACCGTTAC CCTCACGCTG
CCGACGGGTT CTCATCCATC GGTGCAAGTA CCGATTACCG ACATGACAAC CCTCTCGCTG
ACAGCACCGG CGATGAATCC GATCACCCAA ACCTTGCGCA CCGTCGTACA GGCCCTACCG
GTACTCGTCG CCGATCCGGT TAATAGTACA GCGACCGTTC TCCCTGCCGA CACGTACATC
TACCGCCACC GTATCACCAA CAATGGCAAT GTGACGGTGC CGGTTGACGT TAGCGCCGCC
ACCACCGATC CAATTGGACT AGACACCTAC AACACCACTG TGCTGACACC GACAGTTACA
TTAGCGCCGG GAGCTAGCGC CGAGATTGCA GTTCGTATCA CTGTACCGTC AGCCGCCCAG
ACTACCGACC CCGACGGTAA TCCGCTACGG GCCACAACCT TGATTACCGC TACCCCACGT
GGCTTCGGCC CACAAACCAT CACGATGAAT GACACAACCA GCGTTGGGTT GCGGTATGGG
GCCGAATTAC GCAGCGGCTA TGAACAAGAT GTCCAGGCTG GTCGCGAGGT CGTCTTCTTG
CACACGCTGC GCAACACCAG CAATGGCCGC GCAACCTTCC AACTCAATTT TGCCGCCAGC
CGTGGCAGTA CGCTGGTAGC CTTTGAGTCA GGAACGAGTG GTGTTACGAT CAGCGGCAAT
ACGGTGACAC TTGACAATAT CGCCGGCGCC GGTCGGATTA ATCAGATTAC GTTACGTGTC
CGAGTACGGA TCAGTGAATT GATTTTGCCC GGTAGCCGTG AAACATTACG TATCTGGGCT
TCGATCCCCG GTTCGCCAGA ACCGCTGAGC GGGGCAGAAG TTCAGAATAC AGCAATTGTT
CGCGACTCAT CAGGCGTCTT GGTACCGGTA GTCTGGATTC CGCTCATACT CCAATAG
 
Protein sequence
MHRRRVWWIA ILLFIASILL WPKVSLGQSA VTEFFVDTLA DTAVTDLNNH CIDSLANNNC 
SLRQAIAKAN ATSGTNPISI NFNLITEGTV GTPPYVITLT ERLPPLTRPN VVISADLSFG
TPLIAINANG ADAGLVLNGG NATIEGLVIY GASSDTGSYR GSGIYISSAG NTVRNCIIGL
QLDGTVPPDA QRNRNGIVII GSAARNNQIG DVTKPNTIAG NIANGIVITN ASQNTIKANR
IGVLFTTSTV ARSNGGYGIQ ILSDLTIDPN ARTELNIVGG ATNAERNIIG ANSLSGILIG
GTQTYTTTIS SNLIGVNLDG EPAFGNGGDG IRVEDGAQGT MIGSPNVTQP LVISGNNGYG
IHVRSGGGAA PVQTMINGYT VIGLSRSRTS TRPNGQGGIR FSESTGTATI GSDNGDVQIG
GNGGPGIWLG NGVANATITR AFVGVLPNGT TTFVNNGGIR FDGVAEVTMT RSVIAANTDY
DVHINNVGRV TLDNNIIGLS ADGRTALGSA SAGITVVNSA NVTIGDSSGN VIAATNGPGI
EIGGTTNLTI TIRANTFGLR RDTTGDAFSV AAPNNGPAIR VGNSAQITIA NNLIAGDGSN
TGIELHNVEQ VTVQQNQIGW IADPNGGSNP LPRPARIGIA LTNVTTATLA ANQIRLNTDD
GIQLTHSSAV TINNNNVIEQ NNGDGVQVGG TSLGVTITTN RLRANTGYGV RVTDNARRVS
ITQNQMTANT LGGIALVNTT LYNGTLPDPD QNLDRPNHSI DPPFNLQLFQ DGGVSGNVFT
STAEQEANLE PVSACVGCSI QIYSTDPDLP TPDEQGWQQL ANVSVNGVGA FSTLLSPPPQ
SYRQLVFAAT DQFGNTSVFR SFTPVFDLRL IPIDPIEQSA APGSTINYRL RIENHGNLGV
NRIRLTTTGT LSGWTATVAP SERFTLLPGT GQLLTVTLTL PTGSHPSVQV PITDMTTLSL
TAPAMNPITQ TLRTVVQALP VLVADPVNST ATVLPADTYI YRHRITNNGN VTVPVDVSAA
TTDPIGLDTY NTTVLTPTVT LAPGASAEIA VRITVPSAAQ TTDPDGNPLR ATTLITATPR
GFGPQTITMN DTTSVGLRYG AELRSGYEQD VQAGREVVFL HTLRNTSNGR ATFQLNFAAS
RGSTLVAFES GTSGVTISGN TVTLDNIAGA GRINQITLRV RVRISELILP GSRETLRIWA
SIPGSPEPLS GAEVQNTAIV RDSSGVLVPV VWIPLILQ