Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3145 |
Symbol | |
ID | 7269894 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3821247 |
End bp | 3821921 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643567966 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002464439 |
Protein GI | 219850006 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.35313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGAAC CATCTCGCGA GACGATTGTG CGTGCCCAAC AGGGCGATCA ACAGGCGTTG ACCGATCTGA TTATTAGTCA ACAGCATTAT GTCTACAGTA TCGCGATGAG CGTGTTGAAA AATGCTGATG ACGCCGCCGA TCTGACCCAA GAGGCGTTCA TTCGTCTGTT TCGTACTCTT CCTCAGTACA ACGGCGAAAG TCGCTTTACC ACATGGCTGT ACCGGCTTGT CGTTAATCTG TGCCGCGATG AACTCCGTCG ACGTGGACGG CAAGCGCCGA TTGTGCCACC TACCCCCGAC GACGATGAGT TCGATGCTTT GCATACGGTG GCTGATTCTG ACCGCTTGAT CGATCCTGCA CAGTCCCTAG ACTTAAACCA GTTACGTCTA GAAGTACGAC GAGCGCTCGA ACAACTTGAA CCACATTACC GGCTGGTGCT TACGCTGTAT TATTTCGAGG ACCTGAAGTA TACCGATATT GCCGAAATCC TTGACCTACC GCTCAATACG GTCAAGAGTC ACATCCGCCG CGGTAAGGAG CGATTAGCAC AACTGTTGCA AGCCGATGAA CCACCAACAG CGCGTGCTGT TCGTCAGCCG ACACAGAAGC CGGCTGACGA TCACTTGCTG TGTATTACAC CGCTACGCCT GCAGCCGGGG TGGGGGAGGA GGTGA
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Protein sequence | MAEPSRETIV RAQQGDQQAL TDLIISQQHY VYSIAMSVLK NADDAADLTQ EAFIRLFRTL PQYNGESRFT TWLYRLVVNL CRDELRRRGR QAPIVPPTPD DDEFDALHTV ADSDRLIDPA QSLDLNQLRL EVRRALEQLE PHYRLVLTLY YFEDLKYTDI AEILDLPLNT VKSHIRRGKE RLAQLLQADE PPTARAVRQP TQKPADDHLL CITPLRLQPG WGRR
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