Gene Cagg_3138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3138 
Symbol 
ID7269887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3814109 
End bp3814396 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content49% 
IMG OID643567959 
Productprotein of unknown function UPF0044 
Protein accessionYP_002464432 
Protein GI219849999 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1534] Predicted RNA-binding protein containing KH domain, possibly ribosomal protein 
TIGRFAM ID[TIGR00253] putative RNA-binding protein, YhbY family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCG CTCAACGTGC GTATTTACGT CGGCTCGCCC ATCCGTTGCC GGTGACGGTT 
ATGATCGGTA AACATGGGCT GACCGAAAAT GTGCTCTCGA AGATTGAACA AGAACTCGAT
GCTCACGAAT TGATCAAGAT GCGCTTCCTT GATTACAAAG ATCTGAAACA GCCGTTGTTA
GAGGCGATTG TAGCGACAAC AGGTGCTGAA TTGGTGGCAA CGATTGGTCA TACTGCCATT
CTCTATCGCC AGCATAGCGA CCCGGCACAG AGGAAGATTG TGCTATGA
 
Protein sequence
MKPAQRAYLR RLAHPLPVTV MIGKHGLTEN VLSKIEQELD AHELIKMRFL DYKDLKQPLL 
EAIVATTGAE LVATIGHTAI LYRQHSDPAQ RKIVL