Gene Cagg_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3135 
Symbol 
ID7269884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3811520 
End bp3812368 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content56% 
IMG OID643567956 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_002464429 
Protein GI219849996 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAATTG CGATTACCGG AGCAAATGGT CAGTTGGGGC GTGCATTGAT CGCAACGCTC 
GCCCGTCATC ACGATGTTGT CGCGTTGGGT CACGATCAAC TCGAGTTGTC CGACCCGGCC
ACGGTTGATC AGATCGCGAA CACGCGGGCA GAGGTTGTTA TCCACGCTGC TGCCTATACC
AATGTTGACG GCTGTGCTCG TGATCCCGTA TTAGCCTATC GGGTAAACGG GTTGGGTACG
CGCTATGTGG CGCTCGGTTG CCGTCGAATT GATGCAGCGA TGGTCTACAT CAGCACCAAT
GAGGTATTTG CCGGTACGAG CCATCGCCCA TACTATGAAG ATGACCCCAC CGGACCGATC
AATCCCTATG GGCAGAGCAA ATTGGCCGGT GAACAGGAAG TTCGTTTTCT CGTGGCGCGC
CACTTTATCG TGCGGGTTGC CTGGTTGTTC GGTGGTGAAC GTAATTTTGT GCAAACGGTG
TTACGCTTAG CCGCTAATCC GCCAAACGGC GTACTCCGTA TGGTTGCTGA CGAGATCGGC
AGTCCGACAT ATGCTGGCGA TGTAGCGGCA GGGTTGGCGC GCTTGATTAC GACCGATTAT
TACGGAACGT ATCATTTTGT CAACGACGGG ATATGTTCGC GCTATGAGTT TGCCGCCGAG
ATTTTGCGCC AAGCGGGGAT TGATACGCCG CTGCTACCGA TCCGGTTACG TGATTTTCAG
CGCGATAGTA CCCCGCCACC CTACACACCG TTGGCGAATA TCGCCGGGGC TGCACTCGGG
ATTACTTTCC GTCCGTGGCA GGAGGCCGTT GCCGATTATT TGGAGCGTCT GCGCTCTGCG
CACGTATGA
 
Protein sequence
MRIAITGANG QLGRALIATL ARHHDVVALG HDQLELSDPA TVDQIANTRA EVVIHAAAYT 
NVDGCARDPV LAYRVNGLGT RYVALGCRRI DAAMVYISTN EVFAGTSHRP YYEDDPTGPI
NPYGQSKLAG EQEVRFLVAR HFIVRVAWLF GGERNFVQTV LRLAANPPNG VLRMVADEIG
SPTYAGDVAA GLARLITTDY YGTYHFVNDG ICSRYEFAAE ILRQAGIDTP LLPIRLRDFQ
RDSTPPPYTP LANIAGAALG ITFRPWQEAV ADYLERLRSA HV