Gene Cagg_3127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3127 
Symbol 
ID7269876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3786654 
End bp3787889 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content54% 
IMG OID643567948 
Productchlorophyllide reductase iron protein subunit X 
Protein accessionYP_002464421 
Protein GI219849988 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR02016] chlorophyllide reductase iron protein subunit X 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCGC ATCCCAAGCA GAAACAGACC AGTACGACCG CCCGGATGCT GGCCGTTTAC 
GGCAAAGGCG GTATGGGAAA GTCGTTCTTT ACTACCAATC TGGTCAGCAA ATTGGCACTC
TTGGGAAATA GGGTTCTCCA GCTCGGTTGC GATCCGAAAC ACGATAGCTG TAATGCTCTC
TTCGGTGGAG TAAGCTTACC CACGCTTGGC GATGTCTGGC GTGAGTTTAA GGAAGCCGGG
CGAGAAGATG AATTGGCTCC GCATCACGTC ATCTTTAAGA CAACCATTAT GGACGGAGCA
GCAACCGTCT ACGGTTGTGA GATCGGTGGC CCTGAAGTTG GACGTGGTTG TGGTGGACGC
GGCATCACGT TCGGCTTTGA TATGCTCGAA AAATTCGGTC TGAGCCAATG GGCGCTCGAC
TTTGTCGTCA TGGACTTTCT GGGCGATGTC GTGTGCGGTG GTTTTGCGAC CCCCCTCTCA
CGTTCGCTGG CCGAAGAGGT CATTATTCTC TGTGGCAACG ACCGCCAAAG CCTTTACGCA
GCGAACAATA TTGCCAGTGC GGCCAAGTAC TTTGCCAGCA TGGGTGGGCG GACGAAACTC
CTCGGATTGG TCGTCAATCG TGACGATGGC AGTGGCGTAG CCGCTCGCTT TGCCGAGAAG
ATTAACTTAC CGGTGTTGGC AAGCATTCCA CTCGACCGCA CCGTGCGTGA ACTGGCCGAC
GCCTGTAAAC TCGCCTTGCA AGAACCTCGC TTTGACGTGA TTTTCGACCG CCTGGCCCGC
CAGATCATTG ACCGCACACT ACCGGAAGTG AAGATGGAAG AAGTACAGCC ACTCGCCTAC
AAAGAGTTTT TGAGTGTCTT TGGTGCAGAG GAGCCGGACA TTGTACCCGA TGGGGCGAGT
GCCGAAGAAT TGTTTGGTGG GCAACCACAG CGGAAACCGG CACCGGTGAT TACACTGGGT
CTGATGGAGC GTGCAGTGGG CGACAAACCC GACATGGATG CACCAACCCG AATGGTGGTC
AAGCGCTTAC TCAACGAACT CGGTATGTAC GTTACGGAAG CCAACCACGA TCCCAAGAAA
GGAATGACGC TCACCGTTGA CGGCTACACC ACCATTTGCA TAGGGAGCGC TGACGATCTC
GATAGTAAGA TTGCCATTCT GGCTGCGTTA AAGCGTTCGG GTGAGCAATT CCGTTATGTC
GATTTACGGC GACCGGCAAG CCCATTTTAT CGGTAA
 
Protein sequence
MPAHPKQKQT STTARMLAVY GKGGMGKSFF TTNLVSKLAL LGNRVLQLGC DPKHDSCNAL 
FGGVSLPTLG DVWREFKEAG REDELAPHHV IFKTTIMDGA ATVYGCEIGG PEVGRGCGGR
GITFGFDMLE KFGLSQWALD FVVMDFLGDV VCGGFATPLS RSLAEEVIIL CGNDRQSLYA
ANNIASAAKY FASMGGRTKL LGLVVNRDDG SGVAARFAEK INLPVLASIP LDRTVRELAD
ACKLALQEPR FDVIFDRLAR QIIDRTLPEV KMEEVQPLAY KEFLSVFGAE EPDIVPDGAS
AEELFGGQPQ RKPAPVITLG LMERAVGDKP DMDAPTRMVV KRLLNELGMY VTEANHDPKK
GMTLTVDGYT TICIGSADDL DSKIAILAAL KRSGEQFRYV DLRRPASPFY R