| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3121 |
|---|
| Symbol | |
|---|
| ID | 7269539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3780309 |
|---|
| End bp | 3781766 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643567942 |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_002464415 |
|---|
| Protein GI | 219849982 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTCTA AATCACGAGG CCCAACCCTA TTCGACGCGC AACGTCAACA AACGTTGCAG
CAACAAGCGC CACTCGCGGC GCGGATGCGC CCACGCACAC TCGACGAATT CGTCGGGCAG
ACGCATATCA TCGGTGAGGG TAAACTGCTG CGGCGGGCAA TTGCCAACGA TCAGCTCTTT
TCGCTGATCT TGTGGGGGCC GCCGGGGAGT GGCAAGACTA CACTGGCTCA GATTATCGCA
AATAGTACCA ATGCCCACTT CGAGCCGCTG AGCGCAGTGA GCGCCGGGGT CAACGATCTG
CGGCGGGTCG TGCAAGAGGC CAAAGATCGG CTAGGTATGT TCCAACAACG CACGGTCGTC
TTTATCGACG AAATCCATCG CTTTAACAAG AGCCAGCAAG ACGCAATTCT CCCCTATGTA
GAGGATGGCA CGATCATCCT CATCGGCGCG ACAACCGAGA ACCCTTCGTT TGAAGTTAAT
GCAGCCTTGC TATCGCGAGC GCGCGTCTTC ACGCTTGAAG CGTTGACCGA TGAAGAGATC
GGCATACTGA TCGACCGGGC ATTGAGCGAC CGTGAGCGTG GGCTAGGCGG TATGAAGATC
ATGCTGGCGA GCGATGCGCG TAAGTACCTT ATCAATATGT CAAACGGTGA TGCACGAACC
GCATTAAACG CGCTCGAGGC AGCAGCCCGC TCGAAGCCAC CGGCCATCGG CGAGACTCGG
CTGATCACGG TTGATGATAT TCGCGACGCA TTGCAAAGCC GAGCTGTGCG CTACGATAAA
CGTGGTGAGT TGCATTACGA CGCTATCTCG GCGTTGCACA AAAGCGTGCG TGACAGCGAT
CCCGACGGTG CGCTGTATTG GTTGGGACGT ATGCTCGATG GCGGTGAGGA TCCGCTCTAC
ATTGCCCGCC GGCTAGTACG GATCGCGGTA GAAGATGTGG GATTGGCCGA TCCACAAGCG
TTACCGCAGA CGATTGCAGC GCAGCAAGCG GTACATTTTC TGGGTCAACC GGAAGGTGAG
TTAGCGCTGG TGCAAGCGGT GGTCTACCTT TGCCTCGCGC CGAAGAGTAA TGCCCTCTAC
CGCGCGTACA ATGCGGTGCA ACGTGACGTG GCCGAAACCC GCAACGAACC GGTACCGCTC
CATTTACGGA ATGCGCCAAC GGAGTTGATG AAACGGTTAG GCTACGGACG GGGCTACGAA
TATGCGCATG ATTTACCGGA AGGTCGGTCG GATCAAGAGC ATCTGCCACC GAATCTGGTT
GGGCGGATCT ACTACGAGCC GACTAACCGT GGTTTTGAAG CGGTAGCCCG TGAACGATTG
GCGTGGCGCG AGGAACGGCG ATCGCAACCG GAACCACCAG CACCGGCACC GCCCGAGGAG
TTAGCACCCG GCGAAGAACC CCAGGAGCCG CCGGCGGAAG TACCGCCACG GCGACGTGGC
AAACGAACTA CATCCTAG
|
|---|
| Protein sequence | MPSKSRGPTL FDAQRQQTLQ QQAPLAARMR PRTLDEFVGQ THIIGEGKLL RRAIANDQLF
SLILWGPPGS GKTTLAQIIA NSTNAHFEPL SAVSAGVNDL RRVVQEAKDR LGMFQQRTVV
FIDEIHRFNK SQQDAILPYV EDGTIILIGA TTENPSFEVN AALLSRARVF TLEALTDEEI
GILIDRALSD RERGLGGMKI MLASDARKYL INMSNGDART ALNALEAAAR SKPPAIGETR
LITVDDIRDA LQSRAVRYDK RGELHYDAIS ALHKSVRDSD PDGALYWLGR MLDGGEDPLY
IARRLVRIAV EDVGLADPQA LPQTIAAQQA VHFLGQPEGE LALVQAVVYL CLAPKSNALY
RAYNAVQRDV AETRNEPVPL HLRNAPTELM KRLGYGRGYE YAHDLPEGRS DQEHLPPNLV
GRIYYEPTNR GFEAVARERL AWREERRSQP EPPAPAPPEE LAPGEEPQEP PAEVPPRRRG
KRTTS
|
|---|
| |