Gene Cagg_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3120 
Symbol 
ID7269538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3779049 
End bp3780206 
Gene Length1158 bp 
Protein Length385 aa 
Translation table11 
GC content56% 
IMG OID643567941 
ProductFAD dependent oxidoreductase 
Protein accessionYP_002464414 
Protein GI219849981 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACC GAGCACACGT TGTCATTATC GGTGCAGGCG TGATCGGCGC CAGTATTGCC 
TTTCATCTGG CCGAGCGTGG TCTGCGCGAT GTGATCATCC TTGAACGCGA AGAAGCCGAA
ATCAGCGGAA GCACTGCTCG TTCGGCAGCC GGCGTGCGTC ACCAATTTTC ATCACGTACC
AACGTATTAC TGTCGCGCTA TAGTATCGAA CGGTTACGCC ACTTCGAGGA AGAGGTCGGC
GGTCACGCCG AACTACGCCA AGTCGGTTAT TTATTTCTGA TTAACGACGA AGCGACGTGG
GCGCAATATA TGCGTAATGT CACAATGCAA CGCGAGCTGG GAGTGCGGGT TGAGGTACTT
ACTCCTGACG AAGCAGCTCG CTTTATTCCG AGGATGCGGA TCGACGACCT CATTGGAGCA
ACATTTGGCC CTGATGACGG TTACTGCGAT CCCTACGGTA TCGCGCTCGG TTATCTGCGC
GCCGCACAAC GTCACGGTGT GCGTCTGTAC CGTGGGACAC CGGCTATCGG ATTCCATATT
GATAGTGGGC GAGTCACGGC AGTTGAAACG CCGGCCGGTA CAATTGGCTG TGAGATCGTG
ATCAACTGTG CCGGGCCATG GGCCGGTGAA GTAGCGGCGT TGGCCGGTCT CGATTTACCG
GTGCGCCCAT ACCGTCGCAA CGTCTATATG ACCACCCCCT TCCCGGCCAT CAATGCACCT
ATTCCGCTCA CCATTGACGT TGGCACCGGT TTCTATATGC GACGCGAAGG TCAGAGTATT
TTGATGGGCC GCTCGAACCC GAACGAGCCG AGTAGTACCA ACACGAACGT CGACTGGGAA
TGGCTAGAAG CGGTGATAGA AGCCGGCATC TATCGCTTCC CGATCCTTGA GTCGGCAGGG
TTGGCCGAGC AACAGTGTTG GGCCGGGCTA TACGAAATCA CCCCGGATCA TAACCCAATC
CTTGGCCGAC ACCCCGACCT TGAAGGTTAT ATTGATGCCA GCGGCTTTAG TGGCCATGGC
ATTATGCATG CCCCGGCTAC CGGTCTGCTG ATCGCCGAAG AGGTGATCGA TGGACGGGCA
CACACTATCA ATATCGACGA GCTGCGGATC GACCGGTTCC GCCGCGGTCA ACTCGCATCC
GAATTCAACG TTATCTGA
 
Protein sequence
MIDRAHVVII GAGVIGASIA FHLAERGLRD VIILEREEAE ISGSTARSAA GVRHQFSSRT 
NVLLSRYSIE RLRHFEEEVG GHAELRQVGY LFLINDEATW AQYMRNVTMQ RELGVRVEVL
TPDEAARFIP RMRIDDLIGA TFGPDDGYCD PYGIALGYLR AAQRHGVRLY RGTPAIGFHI
DSGRVTAVET PAGTIGCEIV INCAGPWAGE VAALAGLDLP VRPYRRNVYM TTPFPAINAP
IPLTIDVGTG FYMRREGQSI LMGRSNPNEP SSTNTNVDWE WLEAVIEAGI YRFPILESAG
LAEQQCWAGL YEITPDHNPI LGRHPDLEGY IDASGFSGHG IMHAPATGLL IAEEVIDGRA
HTINIDELRI DRFRRGQLAS EFNVI