Gene Cagg_3118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3118 
Symbol 
ID7269536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3777806 
End bp3778570 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content61% 
IMG OID643567939 
ProductABC transporter related 
Protein accessionYP_002464412 
Protein GI219849979 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.758008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAATAC TCGAACTTCG TGCGATCAGT AAGACCTTCG CATCGCCAAC CGGTCCGGTT 
CAGGTGCTCG ACCGGCTGAG TATGCAGGTC GCGGCGGGCG AGTTTGTCGC CGTTATTGGT
CCGAGCGGGA GTGGAAAAAC GACCCTCTTC AACATCATTG CCGGCCTTGA ATTGCCTGAT
GCCGGTGCAG TGCTGATCGA TGGGATTGAG GTGACCGGTC GGCGCGGGCA GGTGGCGTAT
ATGCCGCAAC GCGACGCACT GTTGCCGTGG CTGTCGGTGA TCGAGAATGC GGTGTTGGCG
ACGGTTGTGC AGGGTGGCGA TGTTGCCGCG GCCCGCCGCG AGGCGCGTGC GTTGCTGGCC
GATTTCGGCT TGCAAGGCTG GGGTGATGCC CGCCCTGCTC TTTTGTCAGG TGGGATGCGT
CAGCGCGCCG CTTTTTTACG CACCGTCCTC TGGCATCGCC CGATTATGCT GCTCGACGAA
CCTTTCGGTG CGCTCGATGC ACTTACCCGG GCTCAGTTGC AGCAATGGCT GCTGACGCTC
TGGGATCGGT TGGATCGCAC CGTCGTGCTC GTTACTCACG ACATCGATGA GGCGATCATT
CTCGCCGACC GTATCTATGT CCTCACGCCG CGCCCGGCGC GGATCGCGTT GGAAGTGCGG
GTCGATCTAC CACGACCGCG CTCGTATGCA CTCGTCACCG ACCCAGCGTT TGTGCGGCTC
AAACGGCAGT TGCAGCAAGT TTTGATGGAC GGTGAGCGAC GATGA
 
Protein sequence
MSILELRAIS KTFASPTGPV QVLDRLSMQV AAGEFVAVIG PSGSGKTTLF NIIAGLELPD 
AGAVLIDGIE VTGRRGQVAY MPQRDALLPW LSVIENAVLA TVVQGGDVAA ARREARALLA
DFGLQGWGDA RPALLSGGMR QRAAFLRTVL WHRPIMLLDE PFGALDALTR AQLQQWLLTL
WDRLDRTVVL VTHDIDEAII LADRIYVLTP RPARIALEVR VDLPRPRSYA LVTDPAFVRL
KRQLQQVLMD GERR