Gene Cagg_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3097 
Symbol 
ID7269514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3757784 
End bp3759169 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content57% 
IMG OID643567917 
ProductGTP-binding proten HflX 
Protein accessionYP_002464391 
Protein GI219849958 
COG category[R] General function prediction only 
COG ID[COG2262] GTPases 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03156] GTP-binding protein HflX 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000356343 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.400149 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATGG TCCGAATGCT TGAACGGTCA AAGGAGACAG CCATTAACGA GATCCGCACT 
CACGACGGAA AACGCCTCCA TCCCACGACA ATGCCGCGCC GGCGGGCTTT GCTGGTCGGT
ACCGAAATCG CCAGTTTTCG TAGCCCATGG CCGGTAGAGG ATTCACTTGA CGAATTGGCC
CTCCTCGCCA AGACGGCCGA TCTGGAAGTA GTCGGTCGGA TTTTTCAACG TTTACCCGAA
CCGCAACCCA AGTTTTTTAT CGGTCCCGGT AAAGTGAAAG AGGTGGCGGC ACTGCGCGAG
CAGACGCAAG CCGATCTCAT CGTGTTCGAC GATGAACTTA GTCCGGCCCA GATCCGTAAT
CTTGAAGAGG AGTTACAAAC GCAAGTTATT GACCGTACTG CGTTGATCCT CGATATTTTT
GCCCGTCACG CTCGCACTCA CGAGGGGCGC TTGCAGGTTG AATTGGCCCA GTATCAGTAC
CTTTTGCCGC GTCTGCGCCG ACAGTGGACG CACCTTGAAC GACAGACCGG TACCAGTGGT
GGTACTTCAG CCGGTGGTAT GGTCGGTCTG CGCGGCCCCG GTGAGACGCA GCTCGAAATT
GACCGCCGCT TGATCGAACG CCGGATCGCG TGGCTGAAAG AGCAATTGGC CGATGTTCAC
CGTCATCGCG AGTTGTACCG TCAGCGTCGG CGTCAGACCG GTGTACCGAT TATCGCACTG
GTCGGCTATA CCAACGCCGG CAAGAGTACC TTACTCAACG CGATGACCGG TGCCGATGTG
TTGGCGGAAG ATAAGCTGTT TGCTACCCTC GATCCGACTA CGCGGCAGGT GTTGTTGCCC
GGTAATACCG TTGCGCTGAT GACCGATACC GTCGGTTTTA TCCAAAAATT ACCACCCCAA
CTGATCGCTG CATTTCGGGC TACTCTTGAA GAAATTGAGG AAGCCGATCT GTTGTTGCAC
GTGGTTGATG TGACCCATCG TAATGCTCAA GAGCATGCAC AGACGGTTGA GCAGACTCTC
CGCGAGCTAA AGGTCGATCA CAAGCCGATC TTGACGGTTC TCAACAAGAT CGATTTGCTC
GAGGGAGCAA CTGCTGAGGG TATTGACCAG ATCGCTGCTG AGATGGGTCT GCCCGGTGAT
ATTGTGGCCG TGTCAGCCCG GCGAGGCTGG GGGTTGCAGA CGCTTGGTGA GCGGATTGTG
GCGACGTTGG CACAACGCAT GGTACGGGTT GATGCCTTGA TCCCCTACCA GCGTAACGAC
CTCGTTGCGC TCTGGCGGCA GCGGGGGGTG ATTGAGTTCG AAGAATTCAG TAGCGATGGC
GCGCATATCG TTGGCCGACT GCCGCCGGCA TTGGCGCCGC AGTTTGCTCG CTTTGCCCGG
GCGTAG
 
Protein sequence
MRMVRMLERS KETAINEIRT HDGKRLHPTT MPRRRALLVG TEIASFRSPW PVEDSLDELA 
LLAKTADLEV VGRIFQRLPE PQPKFFIGPG KVKEVAALRE QTQADLIVFD DELSPAQIRN
LEEELQTQVI DRTALILDIF ARHARTHEGR LQVELAQYQY LLPRLRRQWT HLERQTGTSG
GTSAGGMVGL RGPGETQLEI DRRLIERRIA WLKEQLADVH RHRELYRQRR RQTGVPIIAL
VGYTNAGKST LLNAMTGADV LAEDKLFATL DPTTRQVLLP GNTVALMTDT VGFIQKLPPQ
LIAAFRATLE EIEEADLLLH VVDVTHRNAQ EHAQTVEQTL RELKVDHKPI LTVLNKIDLL
EGATAEGIDQ IAAEMGLPGD IVAVSARRGW GLQTLGERIV ATLAQRMVRV DALIPYQRND
LVALWRQRGV IEFEEFSSDG AHIVGRLPPA LAPQFARFAR A