Gene Cagg_3094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3094 
Symbol 
ID7269511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3755235 
End bp3755936 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content56% 
IMG OID643567914 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002464388 
Protein GI219849955 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00936803 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.247599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAAT TGTATACATC AGATGAATCA TCCTCCGCCG ATCAGGTATA CCAACGCCTG 
CGCCGATTGC TGATCGAGGG CTACTACCCA CCCGGTACCC GTCTCATCGA GGAGCGCCTA
GCCCAAGACC TTGGCGTTAG TCGAACACCG GTGCGACAGG CGCTCGTGCG CGCAGCCGCC
GAAGGGTTGG TACAGATCTT TCCCAATCGC GGCGCGGTAG CCCGGAACTT CACAACCAAC
GATCTGCTCG AGATGTACGA TTTACGCGCT TTGCTCGAAG GGCACGCAGC CTATCTTGCC
GCTCAGCACA TCACAGCGGC ACAGTTGGAG CGGATGGAAG CCGCCGCTGC TGCACTCGAG
GCTTCGTTAC AGCAGCACTT CGACCGTCGT GAAGACGAAG TTCACTTCCT GGTTGAGCAG
AACGCCATCT TTCATCAAAC CATCGCTGAA GCTGCCGGTA ATCAACGCTT GATTGCGATG
CTCAACCAGA TCGTTGCTAT CCCCTTGCAG TTTCGCTCGT TCTATTGGTA TCGCGCCGAA
GAGCGCCACA TCTCCAATTT TTTTCACCGC AGTATCTTGA CCGCACTGAA GTTGGGTGAC
GGTGATCGTG CCCGTGCGAT GATGCGTGAA CACATTTTCT ATGGCCGTGA TGTGTTGTTA
CAGAGCCGGC GCACAGAAAC TGCGGCGTCC GGCGAGGAGT AG
 
Protein sequence
MTKLYTSDES SSADQVYQRL RRLLIEGYYP PGTRLIEERL AQDLGVSRTP VRQALVRAAA 
EGLVQIFPNR GAVARNFTTN DLLEMYDLRA LLEGHAAYLA AQHITAAQLE RMEAAAAALE
ASLQQHFDRR EDEVHFLVEQ NAIFHQTIAE AAGNQRLIAM LNQIVAIPLQ FRSFYWYRAE
ERHISNFFHR SILTALKLGD GDRARAMMRE HIFYGRDVLL QSRRTETAAS GEE