Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3068 |
Symbol | |
ID | 7269485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3730448 |
End bp | 3732901 |
Gene Length | 2454 bp |
Protein Length | 817 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643567888 |
Product | peptidase S45 penicillin amidase |
Protein accession | YP_002464362 |
Protein GI | 219849929 |
COG category | [R] General function prediction only |
COG ID | [COG2366] Protein related to penicillin acylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.554637 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000469192 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
| |
Sequence |
Gene sequence | GTGACATTCA ACCCCTCTCG CATCGGACGG GCCATTGGCA TTACCGTTGG CGCCGTAGCA GCGCTGGCCG GTGTTGGTGC TGTGGCAGCC CTACGCCGAC CTTTACCCCG CACGAGTGGT CGGGTGAGCC TACCTGGATT ACGGGCAGCG GTGGAAATAC GTCGTGACCG GTGGGGTATT CCCCACATTT ACGCCGAACA CAACGAAGAT CTATTCTGCG CGCTCGGTTA TGTACATGCC CAAGACCGCC TCTGGCAAAT GGAACTGCAC CGCCGAATCG GCCATGGTCG GTTGGCCGAA ATCGTTGGTT CGGTAGCTAT TGATTCTGAC CGTTTCATTC GTACACTCGG CTTTAGCCGG ATCGCACATC GAGAAGTTGC GTTGCTTGAC GATGAAACGG CAACGCTTAT GAGTGCATAT ATCCGCGGCG TTAATGCCTG CATCGAGCAG GTTAGTCATC GGTTACCACT TGAGTTTACT ATTCTCGGAT TCCAACCTCA ACCGTGGGAA TTGGCCGATT TACTCGTGTG GCCAAAGATG ATGGCCCTGA ATCTCTCAAC CAATTGGATG CAAGAGCTGC TGCAGGCCCA GATCGTGGCC GTCGTCGGGG CCGAGCGAGC AGTCACCCTC CGTCCGCGCT ATCCTGAAGA CGGGCCACTC ACCGTGCCGG CAGAGGCTCA CTATACCCCC GATCTCGGGA CAGGGGCACT GCAACTGGCC GGTGATGCCT CACTCTTTAC CGGTGAAACC GAAACGCCCC AAGGTTCAAA CGCATGGGTG GTGAGCGGTA CGCGCACAAC CAGCGGCCGT CCACTCTTGG CAAATGATCC CCACCTGAAC GTTGCCATCC CCAACCTCTG GTACCACGTC CATCTGGAGG GTGGCGATTT TCACGTCGCC GGCGCCACTA TTCCGGCTAC CTGCGGTGTC GTGATCGGTC ATAACCAACG TATCGCATGG GGCATAACCA ATGCGCGTAC CGACAACCAA GACCTGTTTA TCGAACAATT CGACCCCGCC GACCCCCGCC GGTACCGGTG GCGTGATGAA TGGCGAACTG CCGATGTCGT CCAGGAAACG ATTAAGGTTA AAGGTCAAAC TGAACCGGTC GTGATCGATG TTCGCATTAC CCATCACGGC CCCATTATCG ATCCGGTCGC CGGAGAACTC CACAGCCAAT CTACCGACGA ATCGGCTCAA ACCGCGCTGG CTTTACGTTG GACCGCCCTC GATCCCTCAC CAACGCTGAC CCGCGCTGTT CTGAAACTCA ACCGTGCCCG TAATTGGACG GAGTTTCGTG CTGCTTTAAC CGATTGGGAC ACTCCACCAC AAAACTTCGT CTACGCCGAC ATTGACGGCC ACATCGGGTA TTGTCTGGCC GGACGACTAC CCCTTCGACG ACAAGGCGAT GGGATGCTGC CGGTCCCGGG TTGGAATGGC GAGTATGAAT GGGAGGGTAT GATCCCGTTT GACGAATTAC CGAGCCAACT CGATCCGGCG AACGGTACGA TTGTGAGCGC TAATCATCGA ATTGCCCCGA GCACATCACG CAACGCCCCT ATTCAGGGCT TTTGGCTGAA CCCATACCGT GCTCAGCGTA TTCAAGCCCT GCTCGACGAG ACCAAACAAC ACGATGTGCG CAGCTTTGCC CGGATTCAAA ATGATGTCCT ATCGCTCCCC GGCAAGGCGC TGGTCGAACA AGTGGCCCGG CTCCAACTGG AAACGAGCAT CGAGCAGCGC GTGCGTGATC TGTTCGTCAC GTGGGACGGG CAACTGCGGG CTGATAGTAT CGGTGGGGCC ATCTATGACG AACTTCGCTA CCGTCTTTTG CGCATCGTCT ACCAGGAAGT AGCCAATCTA TTTAAACGGC CGGCTGCACT AGGATCGTTT AGCGTATTAC CGGCAAATCT CTATCTCGAA TGTGCCTTAC CGATGATATT AGCCCGAATG GCTGAACGTC CCCTCGCTCA GGTTGATGAA TGGCTTGGTG GTGGACGTAG TTGGGGCGGT GTGCTACGGG CTGCATTATC ACAAGCCATC GCCGAACTTA GCGCACGCCT CGGCCCCGAT CCGACGCGCT GGCAGTACGG ACGGTTCCAT ACGCTTACGT TGCGACACCC GCTCGGTAGC ATTCCGGCGC TCACCCCACT GTTCAACCGG GGACCGTGGC CAATGGGTGG CGATATTGAT ACGGTGAATC ATTGCTACAT TCCGCGCGAT ATTGCCGGAA TGACCATCTA CAATGCCCCT TCCCTACGCT TTATTTTTGA TCTGAGTGAT TGGGACAACG CACGGGCAAT CTTGCCTGCC GGTCAGAGTG GTCATCCGGC CAGTTCACAC TATGCCGATA TGACCGATGC ATGGCGTGCC GGTGCGTATC ATCCACTGGT ATGGAGCCGA GCGGCTGTCG AGCGGTATAC TGATGATGTG TTAGTATTGA CAGCCGAAGG CTAA
|
Protein sequence | MTFNPSRIGR AIGITVGAVA ALAGVGAVAA LRRPLPRTSG RVSLPGLRAA VEIRRDRWGI PHIYAEHNED LFCALGYVHA QDRLWQMELH RRIGHGRLAE IVGSVAIDSD RFIRTLGFSR IAHREVALLD DETATLMSAY IRGVNACIEQ VSHRLPLEFT ILGFQPQPWE LADLLVWPKM MALNLSTNWM QELLQAQIVA VVGAERAVTL RPRYPEDGPL TVPAEAHYTP DLGTGALQLA GDASLFTGET ETPQGSNAWV VSGTRTTSGR PLLANDPHLN VAIPNLWYHV HLEGGDFHVA GATIPATCGV VIGHNQRIAW GITNARTDNQ DLFIEQFDPA DPRRYRWRDE WRTADVVQET IKVKGQTEPV VIDVRITHHG PIIDPVAGEL HSQSTDESAQ TALALRWTAL DPSPTLTRAV LKLNRARNWT EFRAALTDWD TPPQNFVYAD IDGHIGYCLA GRLPLRRQGD GMLPVPGWNG EYEWEGMIPF DELPSQLDPA NGTIVSANHR IAPSTSRNAP IQGFWLNPYR AQRIQALLDE TKQHDVRSFA RIQNDVLSLP GKALVEQVAR LQLETSIEQR VRDLFVTWDG QLRADSIGGA IYDELRYRLL RIVYQEVANL FKRPAALGSF SVLPANLYLE CALPMILARM AERPLAQVDE WLGGGRSWGG VLRAALSQAI AELSARLGPD PTRWQYGRFH TLTLRHPLGS IPALTPLFNR GPWPMGGDID TVNHCYIPRD IAGMTIYNAP SLRFIFDLSD WDNARAILPA GQSGHPASSH YADMTDAWRA GAYHPLVWSR AAVERYTDDV LVLTAEG
|
| |