Gene Cagg_3064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3064 
Symbol 
ID7269481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3727084 
End bp3727989 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content54% 
IMG OID643567884 
ProductAuxin Efflux Carrier 
Protein accessionYP_002464358 
Protein GI219849925 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.198977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000102827 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACCAAC TACCCGGCAT TTTTCTCAAT GTCCTCGCCC CGGTCTTTTT ACTCGTCTTG 
CTCGGTTATC TGACCGGCCC ACGACTGCAA CTAGAGGCAC GGACGCTATC GCGGTTCGCT
TATTTTATCC TCACCCCGGC ATTTGTGTTT TACGTACTTA GTCAGACCCG AATTGAAGTC
GGTCTGGCCG GGCGTATGAT CGGCTTCATC ACTGTGGTGT ACCTCGGTTC GATCCTGGTC
GCCTTACTCA TCGCCCGTCT CCTGAAGTGC AGCCCAGCGA TGACCGCAGC ATACGTTATG
CTGGCCGCGT TCGGCAATGT CGGCAATTTT GGCCTGCCGA TCATTCAGTT TGCCGAAGGG
CCGGGAGCAT TAGGTGTTGC GACAGTCTAC TTCTTAGCCA ATCTCGTACT CGCGTTCATC
GTCTGCGTAA GCGCAGCCAA CTTCAGCCGC GGCTTCAGCG TCGGTATGGC CGTTCAAGTC
TTTCGCACGC CGGCGTTATT GGCATTACCA CCGGCCCTAC TTTTCAACTG GTTCGAGATA
ACACTCCCAC CGGTTGTTAT GCGCCCGCTC GAACTTCTGT CGGGAGCGCT CATTCCTACG
ATGCTGATCG TCTTGGGCGC ACAACTCGCT GCTGCCGGTA TTCCTCGCCT CAACGCCGAT
CTCCTCATTG CCAGCGCCAT TCGACTGATC AGCGGCCCGG CGTTAGCATT TGGAATCGTT
GAGTGGTTCG CCCTGCCACA ACTTGAACGC AACGTTGGTA TTTTGCAAGC TAGCATGCCG
ACTGCAGTAT TGGTCAGCAT TATTGCAATG GAAAACAATC TCTTACCCGA ATTTGTTACT
GCCACCGTGC TCTTCTCGAA TCTCGCCAGT ATTGTCACGC TCGCAATCGT ACTCGTGTTC
CTTTAA
 
Protein sequence
MNQLPGIFLN VLAPVFLLVL LGYLTGPRLQ LEARTLSRFA YFILTPAFVF YVLSQTRIEV 
GLAGRMIGFI TVVYLGSILV ALLIARLLKC SPAMTAAYVM LAAFGNVGNF GLPIIQFAEG
PGALGVATVY FLANLVLAFI VCVSAANFSR GFSVGMAVQV FRTPALLALP PALLFNWFEI
TLPPVVMRPL ELLSGALIPT MLIVLGAQLA AAGIPRLNAD LLIASAIRLI SGPALAFGIV
EWFALPQLER NVGILQASMP TAVLVSIIAM ENNLLPEFVT ATVLFSNLAS IVTLAIVLVF
L