| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3062 |
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| Symbol | |
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| ID | 7269479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | + |
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| Start bp | 3724297 |
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| End bp | 3725631 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 643567882 |
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| Product | TRAP dicarboxylate transporter DctM subunit |
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| Protein accession | YP_002464356 |
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| Protein GI | 219849923 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4664] TRAP-type mannitol/chloroaromatic compound transport system, large permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000311576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000136305 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACGATT GGCTCGGTCC CACGATGTTT CTTGGGGCAT TGGTGATACT TGGTATCGGT
TATCCGGTGG CTTTCTCGCT CGGTGCTACG GCAATCGTAT TCGGTATTAT CGGTGTATCC
CTGGGTATTT TTGACCCGAT TATTATTCGG GCGATGCCAT CACGTATCTT CAACGTGATG
TCAAATTATA CGCTGCTCGC TATTCCCTAC TTTATCTTCC TTGGCTCGAT GCTCGAAAAA
TCCGGCCTGG CCGAAGATTT GCTCGATACA ATGGGAGTGC TCTTCGGGCC GGTACGGGGT
GGTCTGGCAA TTGCCGTTGT TGTCGTTGGG GCGTTGTTAG CAGCAACTAC CGGTGTCGTA
GCCGCGACGG TGGTGGCGAT GGGTCTGATC TCACTGCCGA TTATGTTACG TTACGGCTAT
AACAAGGAAT TGGCATGTGG CGTGATTTGT GCCGCCGGAA CGTTGGGCCA GATCATTCCA
CCCTCAGTGG TGTTGGTTGT GCTTGGTGAT CAGATCGGTG TATCGGTAGG TCGGCTTTTC
CTTGGCTCAC TGATCCCCGG TCTCCTGTTA GCAGCGGCGC TGGCGTTCTA CTGCTGGATC
GTTGCTTTGC TTAAACCGGA GATGGCACCG GCGTTGCCTC TGTCGGCTCG CTCAATGACC
GGCGTGGCGC TGGCAAAGCG GGTTATTCAG GTGATGATCC CACCGTTGCT ATTGATTATC
GCCGTGCTTG GCTCAATCTT CTTCGGTATC TCGACTGCGA CCGAGGCTGG TGCCGTGGGT
GCGTTAGGGG CAACATTGCT GGCGCTGGCA AATCGCCGTC TGACGTGGAA GAATTTTATT
GCGGTCTGTG ATTCCACCAT GCGTGCCACT ACCATGGTGA TCTTTATTCT GATCGGTTCG
ACGGCTTTTG CGCTCGTGTT TCGTGCCCTT AGTGGTGATA AGTTTGTCTT CGACCTTATG
GCTAATCTCC CCGGTGGTGC GTGGGGATTT TTACTTGTGA GCATGCTCAT CGTCTTTTTC
CTCGGTTTCT TTATCGATTT CTTCGAGATT TGCTTTATCG TCATCCCGCT GTTTGTACCG
GTGGCAAAGG CGCTGGGCTT CGATCTGATC TGGTTCGGTG TGCTTCTGGG TGCCAATTTG
CAGACGTCGT TCCTTACGCC GCCCTTTGGT TTCGCGCTCT TCTATCTGCG TGGTGTGGCC
CCGCCCGGTA TCACGACCGG TGATATTTAT CGTGGTGTGG TTCCGTTTAT TGCGATTCAG
TTGGCAATTG TAGTCATTTT GATCTTCTTC CCTCAGTTGG CGCTCTATCT ACCGGCGATC
TCGTTTGGTC AGTAG
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| Protein sequence | MYDWLGPTMF LGALVILGIG YPVAFSLGAT AIVFGIIGVS LGIFDPIIIR AMPSRIFNVM
SNYTLLAIPY FIFLGSMLEK SGLAEDLLDT MGVLFGPVRG GLAIAVVVVG ALLAATTGVV
AATVVAMGLI SLPIMLRYGY NKELACGVIC AAGTLGQIIP PSVVLVVLGD QIGVSVGRLF
LGSLIPGLLL AAALAFYCWI VALLKPEMAP ALPLSARSMT GVALAKRVIQ VMIPPLLLII
AVLGSIFFGI STATEAGAVG ALGATLLALA NRRLTWKNFI AVCDSTMRAT TMVIFILIGS
TAFALVFRAL SGDKFVFDLM ANLPGGAWGF LLVSMLIVFF LGFFIDFFEI CFIVIPLFVP
VAKALGFDLI WFGVLLGANL QTSFLTPPFG FALFYLRGVA PPGITTGDIY RGVVPFIAIQ
LAIVVILIFF PQLALYLPAI SFGQ
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