Gene Cagg_3057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3057 
Symbol 
ID7269474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3718764 
End bp3719543 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content58% 
IMG OID643567877 
Producthypothetical protein 
Protein accessionYP_002464351 
Protein GI219849918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000727628 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACTCT ATTATACTGC GACGATTCGT GAACGTCGCC AGTTCGACCA TCTCGTATGG 
AAGTCTCTTA TCGCACCGGA GATAGCGCGT ACCGCTCGGC CTGGTCAGTT TGTGCTTGTG
CGCGTTTCAC CCAGCTTTGA TCCACTCTTG TGGTCGGTAT TCTTTTTGGC CGGCGCCGAT
CCCCATAGTG GCACCGTCGA ATTACTGATC GATCCGCGTG ATTCAGCAGG GGGGTGGTTG
GCCGGATACC CGGTGGGGAC GCAACTCGAC GTATGTATGC CGGTTGTTCC TGCGGTGACG
CCAAACCTGA CGACCCAAAC CTTGTTGCTG GCCGGAGTTG GCCCGACGTT GCCGGCCCTC
CTGTTTACGG CTCGTCAGTA CGCTGCCCGC CTGAGTATTT CTCTTTGGCT CACCGGTGAT
GAGGGATATC TCCCACCGCC GTTTCTCTTG CCGGCAACGG TTGAAGTGCA GACGAGTACC
GGCGGTGCGG CGGCATTGTT CAATCTCCTC ACGGTTTCTC GGGTGGACAA TCCCATACGG
TGGGCCGATC AAATCATCTT TGCCTTGCCA CCGCAGCTTT TTGGTATGGC AGTGGAGGCC
ATCCGTACCG TGCGATTACG GTGGGAACAC GGATTTGCGC AAGTTATCGT AGCCGGGCCG
TTGCCGTGTG GTCTAGGCAT CTGTCGCGTT TGCCAGATCG AGACACGCCA TGGTTGGCAG
CGATGCTGTA TCGAGGGACC GGTGTTCGAT CTGCGTGATC TACGCTTGCC GGTACTATAG
 
Protein sequence
MPLYYTATIR ERRQFDHLVW KSLIAPEIAR TARPGQFVLV RVSPSFDPLL WSVFFLAGAD 
PHSGTVELLI DPRDSAGGWL AGYPVGTQLD VCMPVVPAVT PNLTTQTLLL AGVGPTLPAL
LFTARQYAAR LSISLWLTGD EGYLPPPFLL PATVEVQTST GGAAALFNLL TVSRVDNPIR
WADQIIFALP PQLFGMAVEA IRTVRLRWEH GFAQVIVAGP LPCGLGICRV CQIETRHGWQ
RCCIEGPVFD LRDLRLPVL