Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3056 |
Symbol | |
ID | 7269473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3716542 |
End bp | 3718701 |
Gene Length | 2160 bp |
Protein Length | 719 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643567876 |
Product | hypothetical protein |
Protein accession | YP_002464350 |
Protein GI | 219849917 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000115071 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGATG CTGTCACCGT CAACTCATCC AACTGGTGGA ACCAACCACT CACGGCAACA GGCTGGCTAA ACCATCTCCG CCGCTACGAA GCGGTGTTGC TATTCGCAAG CCTCGCGCTT TACCTCTATA CCCGTTTCAC CGATCTGAGT GCATTCCCGA TCTATTTTTT TTGTGATGAA GCGATTCATG GCGTTTTAGC CCGTGATCTG GTCGCCAACG GGTTTCGGGA TAGCAATGGA GTGTGGTTGC CACCGTACTT TCGCAACGCC GAAAAGTGGA GCCTTAGCCT GAGCGTTTAT GTTCATGCAA TAAGTATACT TTTCTTTGGG TTTGACCGCT CGGTCTGGAT GACCCGCGCT CCATCGGTTA TCGTCGGTCT GCTGGCCCCT ATCGGTATTG CCGCACTCCT TCGCTTTGGC TACCACAACC GGTATTGGTG GCTCGGTATT CTCGCCCTCT GTGATATGCC GGCGTGGTTT CTCCATTCAC GCACCGCGTT TGAAACGGTG CTGATGGTTG CGTTCTATGC ATGCTTTCTC GCAGCATACG TGGCCTATCG CCATTACGAC GACCGCTGGA TTGTGGCGGT GATTTTGTTT GGAGCGGCCA CCTTCTACAG TTACGCCAAC GGCCAGGGCG TGATGTTGAT CAGTAGCCTG CTGCTGTTGA TCAGCGATGC TCGGTACCAT GTTAGCCGAC CACCACAACG CCTGTGGATG GCACTTGCGC TGTTCGCCGT TGTACTGATA CCACTGGTCC GTTTTCGCCA ACTCGAACCT GACGCCACAG TTGAACATCT TCGTACCCTC AATTCGTACT GGTTCCAACC GATGCCGCTT GGCGAAAAGA TCCAACGTTT TCTTACGTTG TACGGTCAAG GACTCGATCC ACGTTATTGG TTTTGGCCCA ATACTATCGA TCTCGACCGG CATCGCTTTC CTGATCGCGG CCATATACCG CTGCTGTTGT TGCCGTTCAT CACCATCGGA CTAGGAGTGT GTCTGTGGCG ATGGTGCGAT TCACGCTACC GGCTGCCTAT CATTGCCGTA CTTGCGGCAC CCTTCAGTAG CGCGCTGGTC GGTATTGCTG TAACCCGAAC CCTGGCAATG GTGGTACCGG CGGCTCTGTT GAGTGTCATC GGACTGAAGG CGGTGATCGA ACGCCTCGTA CCATATCGGC AACGGCTTGT GGCGCTCACG TTGGGGCTTG TTCTCGCCCT CGACAGTCTC ATCCTGCTGC GAACTGCCGT GCTCGGTGGA CCACTTTGGT TCCGCGACTA CGGCTTGTAC GGTATGCAAT ACGGCGCACC TCAGATCTTC GGCGAGACGG TACCGATGCT GTTGGCGCGT GACCCCCAAG CCATAGTACG GGTATCGCCG GTGTGGGCGA ACAATCCGAA CAGTTTTGTT GATTTTTTTC TCGATCCGGC ACAACGCCGA CGTGTTAGCC TGACCAGCAT CGATGCCTAT CTGTACTATC GCGGTGATCT TGATCGACAA CGCGATATTT TTATTATGAC CGCCACCGAG TATCAGCAAG CACAAGAAAG CGGCAAGTTT ATTATTGAAC CGCCTGAACA GATCATTCCA TACCCTGATG GCCAACCCGG TTTTTACGTG GTTCGGCTCA GCTATGTCGC GAACATCGAC GAACTACTAG CAGCCGAACG CGCGACACGC GCCGCGTTGA TTGAAGAGCC GTTCGTCATT GCCGGACAAG AGTTGGTGGT CGCGCATTCC CGCTTTGATA TAGGGAACGT CGCCGATCTC TTCGATGGCA ATCCGGCTAC GTTGGCACGC GGGTTTGAAG CAAACCCACT GGTGATTGAG TTGCGCTTTA CCAACCCCCA ACCGGTGAAC GAGATCGAAT TGACCTTGGG GACGATGGAT TTCAACTTGA TCGTCACCAT CATAACACCA GAGGGAGCAA CAACAACTAT CAGCCAACCG TATCGCAACT TACCACCCGA CCCAACGGTA TCCCTCGCTC TCCCTCAAAC AGTAATGGCA GCACAAGTAC GTTTCGCTAT CTTGCAAGTG GGGATCGGCG AGCCAGCTCA CATCCACGTG CGTGAAGTGC GCTGGCGGGA AGGCGATTCA TCAGTCACTT GCACCCACTG CATCGGCAAT CAGCTTAGCC CGACGCAGAT CGGTTACTAA
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Protein sequence | MNDAVTVNSS NWWNQPLTAT GWLNHLRRYE AVLLFASLAL YLYTRFTDLS AFPIYFFCDE AIHGVLARDL VANGFRDSNG VWLPPYFRNA EKWSLSLSVY VHAISILFFG FDRSVWMTRA PSVIVGLLAP IGIAALLRFG YHNRYWWLGI LALCDMPAWF LHSRTAFETV LMVAFYACFL AAYVAYRHYD DRWIVAVILF GAATFYSYAN GQGVMLISSL LLLISDARYH VSRPPQRLWM ALALFAVVLI PLVRFRQLEP DATVEHLRTL NSYWFQPMPL GEKIQRFLTL YGQGLDPRYW FWPNTIDLDR HRFPDRGHIP LLLLPFITIG LGVCLWRWCD SRYRLPIIAV LAAPFSSALV GIAVTRTLAM VVPAALLSVI GLKAVIERLV PYRQRLVALT LGLVLALDSL ILLRTAVLGG PLWFRDYGLY GMQYGAPQIF GETVPMLLAR DPQAIVRVSP VWANNPNSFV DFFLDPAQRR RVSLTSIDAY LYYRGDLDRQ RDIFIMTATE YQQAQESGKF IIEPPEQIIP YPDGQPGFYV VRLSYVANID ELLAAERATR AALIEEPFVI AGQELVVAHS RFDIGNVADL FDGNPATLAR GFEANPLVIE LRFTNPQPVN EIELTLGTMD FNLIVTIITP EGATTTISQP YRNLPPDPTV SLALPQTVMA AQVRFAILQV GIGEPAHIHV REVRWREGDS SVTCTHCIGN QLSPTQIGY
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