Gene Cagg_3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3036 
Symbol 
ID7266567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3691881 
End bp3692249 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content46% 
IMG OID643567857 
Productanti-sigma-factor antagonist 
Protein accessionYP_002464331 
Protein GI219849898 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000270393 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTTAGAAG ATGAGTTAAA TGTCAATATC CGTCATCGCG AAGGGGTTGC AATTATTGAT 
CTAATCGGTG ATGTGACGAC ATTCGCCGAA GAAAAGATCA ATAATGCGTA TCGCCAGGTA
ACGACGCAGG GTGCTCGTTA CATTTTGCTC AACTTTCGCC AGAATGACTA TATCAATAGT
GCGGGAATTG CAATTCTGAT CGGCATTGTT ACTGAAGTAA ACCAGAATGG GCAAAAGCTG
GCGATTAGTG GCTTGTCGCC GCACTTTCAG AAGATTTTTC GCATGGTCGG GTTGGCACAG
TATGCCGAAA TTTATCAGAC CGAGGAGGAG GCACTGAGTG CTTTTAAGCG GCTCAGTGCA
ATCGAGTGA
 
Protein sequence
MLEDELNVNI RHREGVAIID LIGDVTTFAE EKINNAYRQV TTQGARYILL NFRQNDYINS 
AGIAILIGIV TEVNQNGQKL AISGLSPHFQ KIFRMVGLAQ YAEIYQTEEE ALSAFKRLSA
IE