| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3033 |
|---|
| Symbol | |
|---|
| ID | 7266564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | + |
|---|
| Start bp | 3689794 |
|---|
| End bp | 3690996 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643567854 |
|---|
| Product | putative transposase IS891/IS1136/IS1341 family |
|---|
| Protein accession | YP_002464328 |
|---|
| Protein GI | 219849895 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0675] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000443442 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGTAG TACTCGCGCA CAACATTGAG CTTTGTTCGA TACAAGCGCA AGAAGTGTTC
CTGCGCGAGG CAGTTGGTGT GGTGCGGTTT GTCGACAACT GGGTGCTCAA GGAGTGGCTA
ACGCGTGACG AAGCGTACAA ACATGTGCTG CCCAACCCAC ACGAGGCAGC CCTGAGACGG
CAACCGAACG CGATCAAGTG CATACCTAAG CGTGTACCGC AGTATGCCAT CACGAATCTG
GACAAGGCAT GCAATCGCTT TTTCCGTAAG GAAAGCGGGT ATTCCACCTT CAAGAAGAAG
GGTAGGCACG ACAGTGCCCG TTTTGACAAC GGGTTGGGCA TCGTTCGCTA TGCAGGTAAG
CGTATCAACC TACCCTTTGT CGGGGGGGTA AAGATGCGTG AGGCGCTGCG CTTGATTGGC
AAAACCCGGT CTGCCACGTG CGCGAGCGTG GCAGACCGTT GGTACGTTTC TCTCCCTGTC
GAGGTTGAAG TGCTCAAGCC CATCCGCGAG AGCCAAGCAG CGGTGGGCAT TGATCTGGGC
GTCACCACGG CGGCAACACT TTCAACCGGT GAAAGACTGG AAGGCCCGCA AGCGTTACCC
AAGCATCTTA AGCGTCTGCG CCGTTTGAGC CATCACTATC GTTGCAAAGC CATCGGCAGC
AACAACCGGC GCAAATCGGC GCGGTGCTTG GCGCGGTTTC ACGCGCGCAT TGCCACCATT
TGGCGGGATT GGCTGCACGA CCGGCAGCTT GCCCGCGCGC TTGTCGACAT TAGGATGGAT
AAGTTCAAGC GCCAGCTTCG CGACCAGACG GCGCTCTCTG GTGCGATGCT GGTGGAAGCC
AATCCGTGGT TTCCCTCCTC GAAGATGTGT TTAGGGTGCG GTACCGTGGT GAAAAACTTG
CCGCGTTCCG TTTGGGAATG GACGGGCGAC AGGTGTGGTA CGCACCATGA CTGCGATGTG
AATGCGGCAA AAATCTTGAG TGCCCGGTAC TCACGAGGGG AGTTGCGCCG CCGTCACGCC
TGTGGAGACC GGTCCTGCGG CGGGATAGCG CCGTACCGGT CTCTGCGTAT CTCGTCGGTG
AAGAAGGAAT CAAACGTGTC CTCTTTGGGC ATGGTTCGAG CAACGGAAGG TAGGAATGAC
CGATCAAGAA GGCGCCTCCG AACAAGTTAT CGAATTGCGC CTGCCGAGCC GTTTGGGGTA
TGA
|
|---|
| Protein sequence | MSVVLAHNIE LCSIQAQEVF LREAVGVVRF VDNWVLKEWL TRDEAYKHVL PNPHEAALRR
QPNAIKCIPK RVPQYAITNL DKACNRFFRK ESGYSTFKKK GRHDSARFDN GLGIVRYAGK
RINLPFVGGV KMREALRLIG KTRSATCASV ADRWYVSLPV EVEVLKPIRE SQAAVGIDLG
VTTAATLSTG ERLEGPQALP KHLKRLRRLS HHYRCKAIGS NNRRKSARCL ARFHARIATI
WRDWLHDRQL ARALVDIRMD KFKRQLRDQT ALSGAMLVEA NPWFPSSKMC LGCGTVVKNL
PRSVWEWTGD RCGTHHDCDV NAAKILSARY SRGELRRRHA CGDRSCGGIA PYRSLRISSV
KKESNVSSLG MVRATEGRND RSRRRLRTSY RIAPAEPFGV
|
|---|
| |