Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3030 |
Symbol | rpsL |
ID | 7266561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3686436 |
End bp | 3686891 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643567852 |
Product | 30S ribosomal protein S12 |
Protein accession | YP_002464326 |
Protein GI | 219849893 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0048] Ribosomal protein S12 |
TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000363453 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000189693 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGACTA TTAACCAACT TGTTCGGAAG CCGCGCAAGC CGGTGGTCAA AAAGACAAAA GCCCCGGCCC TGCGCTTCAC CTACAACTCG CTGAAGGGGA AGCTGACTCG CGGCCGCGGA TCGCCACAGA AGCGCGGCGT CTGCACCAAG GTAACAACGA TGACGCCGAA GAAGCCTAAT TCGGCGCTGC GCAAGATCGC CCGCGTGCGG CTCTCCAACG GCCTTGAGGT GACGGCATAT ATCCCCGGCG AGGGGCACAA TCTGCAAGAG CACTCAGTGG TGTTGATCCG CGGTGGCCGT GTGAAGGACT TGCCCGGCGT GCGCTACCAC ATCGTCCGCG GGACGCTCGA CACCCAGGGT GTTAGTGGTC GCAAGCAGGG TCGTAGCAAA TACGGTACGA AGAAGAACCA ACCGGTCGGT AAGGGTGCTC CCGCCGGAAA GGGCGGCAAG AAGTAA
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Protein sequence | MPTINQLVRK PRKPVVKKTK APALRFTYNS LKGKLTRGRG SPQKRGVCTK VTTMTPKKPN SALRKIARVR LSNGLEVTAY IPGEGHNLQE HSVVLIRGGR VKDLPGVRYH IVRGTLDTQG VSGRKQGRSK YGTKKNQPVG KGAPAGKGGK K
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