Gene Cagg_3030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3030 
SymbolrpsL 
ID7266561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3686436 
End bp3686891 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID643567852 
Product30S ribosomal protein S12 
Protein accessionYP_002464326 
Protein GI219849893 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0048] Ribosomal protein S12 
TIGRFAM ID[TIGR00981] ribosomal protein S12, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000363453 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000189693 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGACTA TTAACCAACT TGTTCGGAAG CCGCGCAAGC CGGTGGTCAA AAAGACAAAA 
GCCCCGGCCC TGCGCTTCAC CTACAACTCG CTGAAGGGGA AGCTGACTCG CGGCCGCGGA
TCGCCACAGA AGCGCGGCGT CTGCACCAAG GTAACAACGA TGACGCCGAA GAAGCCTAAT
TCGGCGCTGC GCAAGATCGC CCGCGTGCGG CTCTCCAACG GCCTTGAGGT GACGGCATAT
ATCCCCGGCG AGGGGCACAA TCTGCAAGAG CACTCAGTGG TGTTGATCCG CGGTGGCCGT
GTGAAGGACT TGCCCGGCGT GCGCTACCAC ATCGTCCGCG GGACGCTCGA CACCCAGGGT
GTTAGTGGTC GCAAGCAGGG TCGTAGCAAA TACGGTACGA AGAAGAACCA ACCGGTCGGT
AAGGGTGCTC CCGCCGGAAA GGGCGGCAAG AAGTAA
 
Protein sequence
MPTINQLVRK PRKPVVKKTK APALRFTYNS LKGKLTRGRG SPQKRGVCTK VTTMTPKKPN 
SALRKIARVR LSNGLEVTAY IPGEGHNLQE HSVVLIRGGR VKDLPGVRYH IVRGTLDTQG
VSGRKQGRSK YGTKKNQPVG KGAPAGKGGK K