| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3025 |
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| Symbol | rpsJ |
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| ID | 7266556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3681212 |
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| End bp | 3681520 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643567847 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002464321 |
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| Protein GI | 219849888 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.544765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00279122 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCTAAGC AAAAGGTTCG TATTCGCCTC AAGGCGTATG ATCATAAAAT TCTCGACCAA
TCTGCGCGTC AGATTGTCGA GGCTGCCGAG CGAACAGGCG CACTCGTCGC CGGGCCGGTA
CCACTTCCGA CCAAGATTGA ACGCTACAGC GTGATCCGGT CGGGATTCAT CGATAAAGAC
TCGCAAGAGC AGTTTGAGAT TCGTACTCAT AAGCGGTTGA TCGATGTCCT CGATCCAAGT
CAACAAACAA TTAACGCGCT GATGAAACTC AATCTGCCGG CCGGTGTCGA TATTGAGATT
AAGTTGTAG
|
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| Protein sequence | MAKQKVRIRL KAYDHKILDQ SARQIVEAAE RTGALVAGPV PLPTKIERYS VIRSGFIDKD
SQEQFEIRTH KRLIDVLDPS QQTINALMKL NLPAGVDIEI KL
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