| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3024 |
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| Symbol | rplC |
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| ID | 7266555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3680469 |
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| End bp | 3681101 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643567846 |
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| Product | 50S ribosomal protein L3 |
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| Protein accession | YP_002464320 |
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| Protein GI | 219849887 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0087] Ribosomal protein L3 |
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| TIGRFAM ID | [TIGR03625] 50S ribosomal protein L3, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.371217 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00790921 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTCACG GATTGTTAGG TCGTAAAATC GGGATGATGC AGTACTTCAC CAAGGAAGGG
AGGGCTATCC CGGTAACGGT TATCGCAGCC GGGCCTTGCA TCGTCACCCA GATTCGTACA
CCCGAACGCG ATGGCTATAG CGCGGTGCAG CTCGGTTACG AGGAAGTAGA AGCGCGCAAG
CTCACCAAGC CCCAGCAGGG TCATCTCAAG GCATCGGGCG GTAAGATGTT GCGCTATCTC
CGTGAGTTTA GCGCCGACGA CCCACTTGCC CATAAACCCG GTGAAGTGGT GACAGTTGAG
CTGTTCAAGC CCGGCCAGAA GGTCGATATT TCAGGAACCT CAAAGGGTCG TGGCTTTGCG
GGTGTCGTCA AGCGGCACGG CTTCCGTGGT GGCCCTAAGA CCCACGGCCA AAGTGACCGC
CACCGTGCTC CCGGTTCGAT TGGAGCCGGG ACCACACCCG GTCGTGTATG GAAAGGCCAG
CGTATGGCCG GTCGAATGGG CGGCGACCGC GTCACCATCC AGAATCTGGA AGTGGTTGAA
GTACTGCCCG AACAGAATTT GCTACTGGTA AAGGGCTCCG TTCCCGGCGC CCGCAATGGC
CTGCTTCAGA TCCGCAAAGC GGTGAAGGGC TAA
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| Protein sequence | MIHGLLGRKI GMMQYFTKEG RAIPVTVIAA GPCIVTQIRT PERDGYSAVQ LGYEEVEARK
LTKPQQGHLK ASGGKMLRYL REFSADDPLA HKPGEVVTVE LFKPGQKVDI SGTSKGRGFA
GVVKRHGFRG GPKTHGQSDR HRAPGSIGAG TTPGRVWKGQ RMAGRMGGDR VTIQNLEVVE
VLPEQNLLLV KGSVPGARNG LLQIRKAVKG
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