Gene Cagg_3021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3021 
SymbolrplB 
ID7266552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3678597 
End bp3679421 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content59% 
IMG OID643567843 
Product50S ribosomal protein L2 
Protein accessionYP_002464317 
Protein GI219849884 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0090] Ribosomal protein L2 
TIGRFAM ID[TIGR01171] ribosomal protein L2, bacterial/organellar 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0478203 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00883263 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGTATTC GCATCTACAA GCCAACCTCG GCCGGTCGCC GCAATATGTC GGTTTCGACC 
TTCGAGGAGA TTACCAAGAA ACGACCGGAG CCAGGTCTGA TCGAGCCGCT ACGCAAGAAG
GCCGGGCGTA ATAACCAGGG TCGTATCACG GTGCGCCATC GTGGCGGTGG GCACAAGCGC
TTCTATCGGA TCATCGATTT TAAGCGCGAT AAGTTCGGGA TTCCGGCCAA AGTGCAGGCG
ATTGAGTACG ATCCCAACCG CAGTGCGCGG ATCGCGCTGT TAGCCTACGT CGACGGTGAA
AAGCGTTATA TTATTGCCCC ACTCGGCTTA AAGGTCGGTG ATACGGTGAT GAGTGGCCCC
AACGCCGAGA TTCGGGTTGG GAATGCGTTG CCACTCGGTG CGATCCCGCT CGGTACCCAG
ATCCACAACA TCGAGCTGGA GATTGGACGC GGTGGTGTGT TAGTACGTGC TGCCGGTACT
GCTGCCCAGT TGATGGCCAA AGAGGGCGAT TACGCAACCA TCCGTATGCC CTCCGGCGAA
GTGCGCATGA TCCACCTGCG CTGTATGGCA ACTATTGGGC AAGTCGGGAA CGTCGACCAT
CAGAACATCC GATTGGGTAA AGCCGGTCGC TCACGCTGGC TCGGTCGACG ACCGCGCGTG
CGTGGTGCCG CGATGAACCC CCGCGACCAT CCCCACGGTG GTGGTGAAGG ACGCGCGCCA
CGTGGTATGA GTACGCCAAA GACAAAGTGG GGGAAGCCGG CCCGTGGTGT CAAGACCCGC
CACAATCCGC GCTTCGATCG CTTTATTATC CGTCGGCGCA AGTAA
 
Protein sequence
MGIRIYKPTS AGRRNMSVST FEEITKKRPE PGLIEPLRKK AGRNNQGRIT VRHRGGGHKR 
FYRIIDFKRD KFGIPAKVQA IEYDPNRSAR IALLAYVDGE KRYIIAPLGL KVGDTVMSGP
NAEIRVGNAL PLGAIPLGTQ IHNIELEIGR GGVLVRAAGT AAQLMAKEGD YATIRMPSGE
VRMIHLRCMA TIGQVGNVDH QNIRLGKAGR SRWLGRRPRV RGAAMNPRDH PHGGGEGRAP
RGMSTPKTKW GKPARGVKTR HNPRFDRFII RRRK