Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3021 |
Symbol | rplB |
ID | 7266552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3678597 |
End bp | 3679421 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643567843 |
Product | 50S ribosomal protein L2 |
Protein accession | YP_002464317 |
Protein GI | 219849884 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0090] Ribosomal protein L2 |
TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0478203 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00883263 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGTATTC GCATCTACAA GCCAACCTCG GCCGGTCGCC GCAATATGTC GGTTTCGACC TTCGAGGAGA TTACCAAGAA ACGACCGGAG CCAGGTCTGA TCGAGCCGCT ACGCAAGAAG GCCGGGCGTA ATAACCAGGG TCGTATCACG GTGCGCCATC GTGGCGGTGG GCACAAGCGC TTCTATCGGA TCATCGATTT TAAGCGCGAT AAGTTCGGGA TTCCGGCCAA AGTGCAGGCG ATTGAGTACG ATCCCAACCG CAGTGCGCGG ATCGCGCTGT TAGCCTACGT CGACGGTGAA AAGCGTTATA TTATTGCCCC ACTCGGCTTA AAGGTCGGTG ATACGGTGAT GAGTGGCCCC AACGCCGAGA TTCGGGTTGG GAATGCGTTG CCACTCGGTG CGATCCCGCT CGGTACCCAG ATCCACAACA TCGAGCTGGA GATTGGACGC GGTGGTGTGT TAGTACGTGC TGCCGGTACT GCTGCCCAGT TGATGGCCAA AGAGGGCGAT TACGCAACCA TCCGTATGCC CTCCGGCGAA GTGCGCATGA TCCACCTGCG CTGTATGGCA ACTATTGGGC AAGTCGGGAA CGTCGACCAT CAGAACATCC GATTGGGTAA AGCCGGTCGC TCACGCTGGC TCGGTCGACG ACCGCGCGTG CGTGGTGCCG CGATGAACCC CCGCGACCAT CCCCACGGTG GTGGTGAAGG ACGCGCGCCA CGTGGTATGA GTACGCCAAA GACAAAGTGG GGGAAGCCGG CCCGTGGTGT CAAGACCCGC CACAATCCGC GCTTCGATCG CTTTATTATC CGTCGGCGCA AGTAA
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Protein sequence | MGIRIYKPTS AGRRNMSVST FEEITKKRPE PGLIEPLRKK AGRNNQGRIT VRHRGGGHKR FYRIIDFKRD KFGIPAKVQA IEYDPNRSAR IALLAYVDGE KRYIIAPLGL KVGDTVMSGP NAEIRVGNAL PLGAIPLGTQ IHNIELEIGR GGVLVRAAGT AAQLMAKEGD YATIRMPSGE VRMIHLRCMA TIGQVGNVDH QNIRLGKAGR SRWLGRRPRV RGAAMNPRDH PHGGGEGRAP RGMSTPKTKW GKPARGVKTR HNPRFDRFII RRRK
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