| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3015 |
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| Symbol | rpsQ |
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| ID | 7266546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3676162 |
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| End bp | 3676431 |
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| Gene Length | 270 bp |
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| Protein Length | 89 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643567837 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_002464311 |
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| Protein GI | 219849878 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0267958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00844971 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATGACAG CGGAACAAAA GCGCAAAACG ACAAAGGTTG GTCGCGTCGT AAGCGATAAA
ATGGACAAGA CGGTAGTGGT TAAGGTGGAT TATCTGAAAC CTCACCCGCT CTACCGCAAG
ATTATTCGGC GCTCGAAGAA GTTTCACGCC CACGATGAGG AGAATACCTG TAAAGTGGGT
GATGTGGTGC GGATTGAGGA GACCCGCCCG TTGAGCCGTA CTAAGCGCTG GCGGGTTGTG
GAGATTATTA AACGTGGCGA GGAGGCATAG
|
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| Protein sequence | MMTAEQKRKT TKVGRVVSDK MDKTVVVKVD YLKPHPLYRK IIRRSKKFHA HDEENTCKVG
DVVRIEETRP LSRTKRWRVV EIIKRGEEA
|
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