Gene Cagg_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3013 
SymbolrplX 
ID7266544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3675459 
End bp3675791 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content54% 
IMG OID643567835 
Product50S ribosomal protein L24 
Protein accessionYP_002464309 
Protein GI219849876 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0198] Ribosomal protein L24 
TIGRFAM ID[TIGR01079] ribosomal protein L24, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0278208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00889655 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCATGTCA AGACTGGTGA TGAAGTATTG GTGATTGCCG GTAAAGATAA AGGACGGCGT 
GGAAAAATTA AACGCGCGTT ACCGGCAGTC AATCGAGTGG TGGTCGAAGG CTTGAATATT
GTCAAACGCC ACCAAAAACC GCGTGGCCCC GGCCGCCCCG GCGGTATTGT GGAGATGGAA
GCTCCAATTC ACGTCTCCAA TGTGATGCTG ATTTGTCCGA GTTGTGGACG GGCGTCGCGG
ACCGGTAAGC GTTTCCTTGA AGAGACCGAC CACAAGGGCC GGCCACGCAA GGTACGCTAC
TGCAAGGCCT GCGATGCTAT TATCGATAAG TAG
 
Protein sequence
MHVKTGDEVL VIAGKDKGRR GKIKRALPAV NRVVVEGLNI VKRHQKPRGP GRPGGIVEME 
APIHVSNVML ICPSCGRASR TGKRFLEETD HKGRPRKVRY CKACDAIIDK