| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_3006 |
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| Symbol | rpmD |
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| ID | 7266537 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chloroflexus aggregans DSM 9485 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011831 |
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| Strand | - |
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| Start bp | 3672361 |
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| End bp | 3672558 |
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| Gene Length | 198 bp |
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| Protein Length | 65 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 643567828 |
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| Product | 50S ribosomal protein L30 |
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| Protein accession | YP_002464302 |
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| Protein GI | 219849869 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1841] Ribosomal protein L30/L7E |
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| TIGRFAM ID | [TIGR01308] ribosomal protein L30, bacterial/organelle |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.319275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00803225 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGGCAAGC TGCGCGTAAC ATACGTAAAG AGCGCAATTG GCTATGCGCG TGACCAGAAG
GAAACGCTGG CTGCGCTTGG CTTGCGCCGC TTGAATCAGA GTGTACTCAA ACCGGATAAT
CCATCGGTGC GTGGGATGCT GTTTAAGATT CAGCACCTCG TAAAGGTGGA AGAGGTTGAG
GACGAGGTGC AGGCATGA
|
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| Protein sequence | MGKLRVTYVK SAIGYARDQK ETLAALGLRR LNQSVLKPDN PSVRGMLFKI QHLVKVEEVE
DEVQA
|
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| |