Gene Cagg_3002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_3002 
SymbolinfA 
ID7266533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3669400 
End bp3669621 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content52% 
IMG OID643567824 
Producttranslation initiation factor IF-1 
Protein accessionYP_002464298 
Protein GI219849865 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.275871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00604316 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGAAGA AAAAAGACGT CATCGAGATG GAGGGTACCA TCACGGAACC ATTGCCAAAC 
GCAATGTTCC GGGTGCAACT CGACAATGGG CACGAGGTGC TTGCTCACAT CTCGGGCAAG
ATGCGGATGA ACTACATTCG TATCTTGAAG GGCGACCGAG TGCTGGTCGA ACTTTCGCCG
TATGACCTCA CTCGGGGACG TATCACGTAT CGCTATAAGT AG
 
Protein sequence
MSKKKDVIEM EGTITEPLPN AMFRVQLDNG HEVLAHISGK MRMNYIRILK GDRVLVELSP 
YDLTRGRITY RYK