Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_3000 |
Symbol | rpsM |
ID | 7266531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3668758 |
End bp | 3669138 |
Gene Length | 381 bp |
Protein Length | 126 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643567822 |
Product | 30S ribosomal protein S13 |
Protein accession | YP_002464296 |
Protein GI | 219849863 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0099] Ribosomal protein S13 |
TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.947306 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00676335 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCACGTA TCGCCGGGGT TGATATTCCC CGCAACAAGA AGATCGAAAT TGCAATCACA TACATCTACG GTATCGGTCG CTCGAATGGT ATGGACGTTC TGCGGAAGGC GAACGTTGAT CCCAATCGCC GAGTACGCGA TTTGACCGAA GAAGAAGTAG GCCGGATCCG CGAGATTATC GACCGTGAAT ACCGAGTTGA AGGTGATCTC CGCCGTGAAG TGCAGTTGAA TATCAAACGT CTGATGGATA TTGGCTGCTA TCGCGGTTTG CGCCATCGCC GCGGTATGCC GGTGCGTGGT CAGCGCACAC GTACTAATGC GCGTACCCGT CGCGGGCGTC GCGGTCAGGC GATCGGTATT AAGAAGAAGG TAAAGAAGTA G
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Protein sequence | MARIAGVDIP RNKKIEIAIT YIYGIGRSNG MDVLRKANVD PNRRVRDLTE EEVGRIREII DREYRVEGDL RREVQLNIKR LMDIGCYRGL RHRRGMPVRG QRTRTNARTR RGRRGQAIGI KKKVKK
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