Gene Cagg_2989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2989 
Symbol 
ID7266520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3662109 
End bp3662642 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content53% 
IMG OID643567811 
Productprotein of unknown function DUF177 
Protein accessionYP_002464285 
Protein GI219849852 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000169485 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0081871 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGCAT TACGGTTTAA TCTCGCGCAG TTATTGCGCG AAGAAATGGG AGCACGACGT 
GACATCTCGT TCACCGAAGC GGTCTTGCCG CTCGATGATG AGCTGACCCT GCGGAATATT
ACCGGACGCC TGCGCTTGAC CCGTACCGCA GCCGGTGTGT ATGCCCAGGT AACTGTACAC
GGGATTGTGA CACTGACATG CGTGCGCTCA TTAGAACCGT TTGATTACGA GCTTGATCTC
GACTTCAGCG ACCAGTTTTA TGCGGTGGTC GATGTGGTGA ATGGGCATCG ATTACCACAA
CCGGTAGAGG ATGATCCGTT TATGCTCGAT GAGCTGCACC ATATCGACGT AGGTGAGGCA
ATTCGGAGCT ACGCGCTGAT TAACCTGCCG ATGAATCCGG TGGCACCAGC TTACCGTGAT
CAACCGGTCA ACTATACCGT TGAGTCAGAG GGCATTGAAG AAGAAGACAC CACCACCGAT
GAGCGCTTTG CTGCGCTGCG TGAATGGGTG GAACGACAAC GCAATCAACA CTGA
 
Protein sequence
MTALRFNLAQ LLREEMGARR DISFTEAVLP LDDELTLRNI TGRLRLTRTA AGVYAQVTVH 
GIVTLTCVRS LEPFDYELDL DFSDQFYAVV DVVNGHRLPQ PVEDDPFMLD ELHHIDVGEA
IRSYALINLP MNPVAPAYRD QPVNYTVESE GIEEEDTTTD ERFAALREWV ERQRNQH