Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2989 |
Symbol | |
ID | 7266520 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3662109 |
End bp | 3662642 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643567811 |
Product | protein of unknown function DUF177 |
Protein accession | YP_002464285 |
Protein GI | 219849852 |
COG category | [R] General function prediction only |
COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000169485 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0081871 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGCAT TACGGTTTAA TCTCGCGCAG TTATTGCGCG AAGAAATGGG AGCACGACGT GACATCTCGT TCACCGAAGC GGTCTTGCCG CTCGATGATG AGCTGACCCT GCGGAATATT ACCGGACGCC TGCGCTTGAC CCGTACCGCA GCCGGTGTGT ATGCCCAGGT AACTGTACAC GGGATTGTGA CACTGACATG CGTGCGCTCA TTAGAACCGT TTGATTACGA GCTTGATCTC GACTTCAGCG ACCAGTTTTA TGCGGTGGTC GATGTGGTGA ATGGGCATCG ATTACCACAA CCGGTAGAGG ATGATCCGTT TATGCTCGAT GAGCTGCACC ATATCGACGT AGGTGAGGCA ATTCGGAGCT ACGCGCTGAT TAACCTGCCG ATGAATCCGG TGGCACCAGC TTACCGTGAT CAACCGGTCA ACTATACCGT TGAGTCAGAG GGCATTGAAG AAGAAGACAC CACCACCGAT GAGCGCTTTG CTGCGCTGCG TGAATGGGTG GAACGACAAC GCAATCAACA CTGA
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Protein sequence | MTALRFNLAQ LLREEMGARR DISFTEAVLP LDDELTLRNI TGRLRLTRTA AGVYAQVTVH GIVTLTCVRS LEPFDYELDL DFSDQFYAVV DVVNGHRLPQ PVEDDPFMLD ELHHIDVGEA IRSYALINLP MNPVAPAYRD QPVNYTVESE GIEEEDTTTD ERFAALREWV ERQRNQH
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