Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2982 |
Symbol | |
ID | 7266513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 3654393 |
End bp | 3655856 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643567804 |
Product | type II secretion system protein E |
Protein accession | YP_002464278 |
Protein GI | 219849845 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.330952 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00479532 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCACTGC TTAAACGTCT TACCGGTAGT CCGCCTCAGC CCGAGCCTGC TTCGGCTGTT GCCACCCCTT CTCCACCGGC AGCGTCTGCC GTGACCCCGG CTCCGGTCCC GCCTCCGCCG GTAGCTTCTA CCCCGGCCCC GGCGCGTCCA ACCGTCCAAG ATGCGACTCC GGCTAACGAC CAGAAGCGGA TGCTCGAACT GTCACTCTGG ATCGTTGACC GTATTCAAGC GTCGCTCGGT AGCCAGACTG AATTAAAGCG TTCGCCAGAC ACCGAACGCC TATTGCAGGA ACGGTTTGCG CGGATCTATC AGCAGGCTAA TGTGAACCTT CCCGATCAAG ATGTCAAGAA ACTCTTCGCA ATGGTGTGCG ATGAGTTGTT CGGTTTTGGC CCATTACAAC CGTTGCTCGA TGACGATAGT ATTTCTGAGA TTATGGTCAA CGGGCCTCAC AAAGTGTATA TCGAGCAGAA GGGTAAGCTG AAACTCTCGG ATGTGCGGTT TGCCTCCGAT GAGCACGTGA TGAAAATAAT CGACCGCATT ATTCGTCCAC TTGGTCGTCG TATCGACCGT AAGTGGCCAA TGGTCGATGC CCGCTTACCC GATGGTTCGC GTGTTAATGC GATTATCCCG CCGTGTGCGA TTGATGGGTC GACGATCACG ATTCGTAAGT TCTCGAAGAA TAAGCTTAAG GTCGAAGACC TGATTCGCTT TGGTTCAATG ACCGCCGAGA TGGCCGAGTT CTTGCGCGCC TGCGTGGTCT CACGGTTGAA TATTGTGGTG GCCGGTGGTA CCGGTTCAGG TAAAACAACC TTGCTTAACG TGCTGTCGAA CTTTATCCCT GAAGATGAGC GGATTATCAC GATTGAAGAT AGTGCTGAGT TGCAGTTGGC TCAAGATCAC GTGGTACGCC TCGAAGCAAA ACCACCGGAG ATCGATGGTT CTGGTCGGGT GACGATTCGT GATCTGGTGA TTAACTCGCT GCGTATGCGC CCCGAACGGA TCGTAATCGG TGAGTGTCGT GGTGGTGAGA CCCTCGATAT GCTACAGGCA ATGAATACCG GTCATGACGG TTCACTCACT ACCCTCCACG CCAATACGCC ACGCGATGCA ATCGCCCGTA TGGAGACGAT GTCGCTAATG GCCGGTATGG ATATGCCGCT GCGCGTGATT CGTGAGCAGA TTGCCTCGGC TATTGACCTG ATCGTGCAGC AAACCCGGTT GGAAGACGGT TCACGTAAGG TAGCCTACAT TACCGAAGTG CAGGGTATGG AGGGTGATAC TGTTGTCTTG CAAGATATCT TTAAGCTGGA GATATTGGGC AAGACGCCGG AGGGCAAAAT CATGGCCGAA TTGCGTCCTA CCGGTGTCCG GCCTAAGTTT ACGCCTCGCC TCGAGGCGCA CGGCTTCAAG TTGCCGCCAA GTATCTTCGG TGCGCAAATT CCGGGTCAGC GTGGTCGGTT TTAG
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Protein sequence | MSLLKRLTGS PPQPEPASAV ATPSPPAASA VTPAPVPPPP VASTPAPARP TVQDATPAND QKRMLELSLW IVDRIQASLG SQTELKRSPD TERLLQERFA RIYQQANVNL PDQDVKKLFA MVCDELFGFG PLQPLLDDDS ISEIMVNGPH KVYIEQKGKL KLSDVRFASD EHVMKIIDRI IRPLGRRIDR KWPMVDARLP DGSRVNAIIP PCAIDGSTIT IRKFSKNKLK VEDLIRFGSM TAEMAEFLRA CVVSRLNIVV AGGTGSGKTT LLNVLSNFIP EDERIITIED SAELQLAQDH VVRLEAKPPE IDGSGRVTIR DLVINSLRMR PERIVIGECR GGETLDMLQA MNTGHDGSLT TLHANTPRDA IARMETMSLM AGMDMPLRVI REQIASAIDL IVQQTRLEDG SRKVAYITEV QGMEGDTVVL QDIFKLEILG KTPEGKIMAE LRPTGVRPKF TPRLEAHGFK LPPSIFGAQI PGQRGRF
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