Gene Cagg_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2964 
Symbol 
ID7266495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3634793 
End bp3635887 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content56% 
IMG OID643567786 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_002464260 
Protein GI219849827 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000603569 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACCC AACGCTCAGA TACCACCTTA GTTGAAGTCA AAGATTTGCG TATGCACTTC 
CCGGTAACGC GCGGTATTAT CTTTCAGCGG CGCGTCGGCA CGGTGAAGGC GGTTGATGGG
GTCAATTTTA CGATTAAGCG CGGCGAAACG CTCGGTCTGG TCGGCGAGTC GGGTTGTGGG
AAGAGTACGA CGGGGCGCGC GATTTTACAG CTTTATCGGC CAACCGGTGG GCAGGTCCTG
TTTGAAGGAA TTGATCTGAC CAAACTACGC GGGAATGAAT TACGTCAAAT GCGCCGTCGC
GTGCAGATGA TTTTTCAAGA CCCGTATGCT TCGCTCAACC CACGGATGAC AGTTGGCGAC
ATTATTGCCG AGCCGATCCG GGTGCATAAG CTGCGCGAGG GACGAGCGGT ACGCGAGCGG
GTTGAGGAAC TGTTGCATTT AGTGGGGCTT AACCCGGCGT TCGCCAACCG CTACCCACAC
GAATTTTCCG GCGGTCAACG TCAACGCATC GGGATTGCCC GCGCCTTGGC GGTGGAACCG
GATTTTGTCG TCTGTGATGA GCCGGTGTCG GCGCTCGATG TGTCAATTCA GGCGCAAGTA
GTCAATTTGC TTGAAGAACT TCAAGACAAG TTGGGTTTGA CGTATTTGTT CATTGCCCAC
GATCTGAGTG TGGTTAACCA TATCTCCGAC CGGGTGGCGG TCATGTATCT CGGTAAGGTG
GTTGAACTGG CCGAGGGGTC GAAACTCTAT TCGATGCCAC TTCACCCGTA TACGCAGGCC
CTGCTGTCGG CGGTGCCGAT TCCCGATCCA AAGATTGAGC AGCAACGACG CCGGATCATT
CTCGAGGGTG ATGTCCCAAG CCCGTTGAAT CCGCCATCGG GATGCCATTT TCATACTCGT
TGCCCGATCG CGATCCAGAA GTGCAGAGAA GAAGAGCCGC CCTTCGTCGA CTACGGTGAT
GGGCACTTCG CCGCTTGCTG GCGAGCGCGT GAGAGTGTGA CTCTGATGCC AGAAGTGGCG
CGTAAACAGG CTGAAGCGGT CGCTGCGCGT ATTGCGGCTG ATGCCGAAAA GGTCAAGCAG
ATTTCCCACT CTTAA
 
Protein sequence
MATQRSDTTL VEVKDLRMHF PVTRGIIFQR RVGTVKAVDG VNFTIKRGET LGLVGESGCG 
KSTTGRAILQ LYRPTGGQVL FEGIDLTKLR GNELRQMRRR VQMIFQDPYA SLNPRMTVGD
IIAEPIRVHK LREGRAVRER VEELLHLVGL NPAFANRYPH EFSGGQRQRI GIARALAVEP
DFVVCDEPVS ALDVSIQAQV VNLLEELQDK LGLTYLFIAH DLSVVNHISD RVAVMYLGKV
VELAEGSKLY SMPLHPYTQA LLSAVPIPDP KIEQQRRRII LEGDVPSPLN PPSGCHFHTR
CPIAIQKCRE EEPPFVDYGD GHFAACWRAR ESVTLMPEVA RKQAEAVAAR IAADAEKVKQ
ISHS