Gene Cagg_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2956 
Symbol 
ID7268829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3621134 
End bp3623014 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content57% 
IMG OID643567778 
Productchaperone protein DnaK 
Protein accessionYP_002464252 
Protein GI219849819 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID[TIGR02350] chaperone protein DnaK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000146518 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000122718 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAAAA TTGTAGGAAT TGACTTGGGC ACGACCAACT CGTGCATTGC GGTGATGGAA 
GGCGGTGATG TAGTTGTCAT CCCCAACGCC GAAGGCAACC GCACGACACC GTCGGTCGTG
GCGTTTACGA AGAATGGTGA ACGGTTAGTC GGCTTGACCG CGAAGCGTCA AGCAACGATT
AACCCGGAAA ATACGCTCTA TTCGGTGAAG CGGTTTATCG GTCGCTCGTT TGATGAAGTA
ACTGAAGAGC GTGAGCGGGT ACCCTTCAAG GTTGTGAAGG GGCCGCGTAA CGACGTGCGT
ATCTATGTAC CACAGACCGG CAAAGAGTAT GCACCGCAGG AGATCTCGGC AATGGTCTTG
CAGAAGCTCA AAGCTGACGC CGAGGCCTTC CTTGGTGAGC CGGTGACTCA GGCGGTGATT
ACGGTGCCGG CCTATTTCAA CGATAGTCAG CGTCAGGCGA CGAAAGACGC CGGTAAGATT
GCCGGGCTGG AAGTATTGCG CATCATTAAC GAGCCGACGG CTGCGGCACT GGCCTATGGT
CTTGATAAGA AGAAAGACGA GACCATCCTC GTCTTCGACC TCGGTGGTGG TACGTTCGAC
GTGAGTATCC TCGAGGTTGG TGATGGTGTC ATCGAGGTCA AGGCGACGAG CGGTGACACC
CATCTTGGTG GTGACGACTA CGATGCCGCC ATCGTCAACT GGATCATCGA TGAGTTCCGC
AAAGATCAGG GCATTGACCT GAGCAAAGAC CGACAAGCTT TGCAACGGCT CAAAGAGGCG
GCGGAAAAGG CCAAGATGGA ACTCAGCTCG ATGATGGAGA CTGAGATCAA CCTGCCCTTC
ATCACGGCTG ATGCCAGTGG GCCGAAGCAT CTGGCGATGA AGTTGACGCG GGCTAAGTTC
GAGCAATTGA CGGCGCATCT GACCGAACGC TTGCGCGATC CTGTGTTGCG CGCGCTAAAA
GATGCCGGCT TGCAGCCGAG CCAGATTGAT GAAGTGGTAC TGGTTGGTGG TTCGACCCGC
ATGCCGGTTG TGCAAGAGTT GGTGCGCAAG ATGCTCGGCA AAGAGCCGAA CAAGAGTGTC
AACCCAGACG AAGTAGTGGC GGTTGGCGCT GCGATCCAGG CTGCCGTGCT GGGTGGTGAA
GTCAAAGACG TGCTGCTGCT TGACGTGACG CCGCTGTCGC TCGGTGTGGA GACGCTCGGT
GGTGTGATGA CGAAGCTAAT CGAGCGCAAC ACGACCATCC CGACCCGCAA GACCGAAATC
TTCTCGACCG CAGCCGATGG TCAGACGGCG GTTGACATCC ACATCTTGCA GGGTGAGCGT
GAGATGGCGG CGGACAATAT CTCACTGGGT CGCTTCCGCC TCGAGGGTAT TCCGCCGGCG
CCGCGTGGTG TGCCGCAGAT CGAGGTAACG TTCGATATTG ACGCGAACGG TATCTTGAAT
GTGAGCGCAC GTGATAAAGC GACCGGTAAG GAGCAGCGGA TTACGATCAC CGCAAGCACT
AACCTCTCGA AAGAGGAAGT GGAGCGGATG GTTCGCGAGG CACAGCTCCA CGCTGCTGAA
GACAAGGCGC GCCGTGAGTT GGTTGAGCTG AAGAATCAGG CCGATAGCCT CGCCTATCAG
GCTGAGAAGT CGCTCAAGGA GCTGGGTGAC AAGGTTGATA GCATTGAGCG CAGCCGGATC
GAGAACTTGA TCAAAGACCT GCGCGAGGCT ATTGCCAAGG AGGAGCGCAG CCGCATCCAA
CAACTCTCGA ACGAGTTGCA GCAGGCGGTG TTCAAGATCT CGCAGGCGGC TTACGGCGAT
GGTGCTACCC CAGGTGCCGG CGGTAGCAGC AGTGGCCGTA AGGATGATGG GGTCGTCGAA
GGTGAGTATA CCGTGAACTA A
 
Protein sequence
MGKIVGIDLG TTNSCIAVME GGDVVVIPNA EGNRTTPSVV AFTKNGERLV GLTAKRQATI 
NPENTLYSVK RFIGRSFDEV TEERERVPFK VVKGPRNDVR IYVPQTGKEY APQEISAMVL
QKLKADAEAF LGEPVTQAVI TVPAYFNDSQ RQATKDAGKI AGLEVLRIIN EPTAAALAYG
LDKKKDETIL VFDLGGGTFD VSILEVGDGV IEVKATSGDT HLGGDDYDAA IVNWIIDEFR
KDQGIDLSKD RQALQRLKEA AEKAKMELSS MMETEINLPF ITADASGPKH LAMKLTRAKF
EQLTAHLTER LRDPVLRALK DAGLQPSQID EVVLVGGSTR MPVVQELVRK MLGKEPNKSV
NPDEVVAVGA AIQAAVLGGE VKDVLLLDVT PLSLGVETLG GVMTKLIERN TTIPTRKTEI
FSTAADGQTA VDIHILQGER EMAADNISLG RFRLEGIPPA PRGVPQIEVT FDIDANGILN
VSARDKATGK EQRITITAST NLSKEEVERM VREAQLHAAE DKARRELVEL KNQADSLAYQ
AEKSLKELGD KVDSIERSRI ENLIKDLREA IAKEERSRIQ QLSNELQQAV FKISQAAYGD
GATPGAGGSS SGRKDDGVVE GEYTVN