Gene Cagg_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2945 
Symbol 
ID7268818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3608837 
End bp3610261 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content59% 
IMG OID643567767 
Productdomain of unknown function DUF1727 
Protein accessionYP_002464241 
Protein GI219849808 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.833945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00605856 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCACCG TGACTATCTA CCGTATGAAC CATTTACGCA CTACTGTCGC ATTAGCCTTG 
GGACGTACCG CCAGAATTCT CTCCCGCCGT TTCCATCTCG GCGGCGGGAC GAGCTTACCC
GGTCAAATCG CCCGCTCAAT TGAACCGGCA ATCTTGACCA CCATTTGCAC GGCATTACCC
GATGGTGTGA TTCTGATCGC CGGCACCAAC GGGAAGACCA CGACGAGTCG CATGTTAGCG
GCCATTCTCG AACATACCGG CGAACCACTG TTGCACAACC GCGCCGGTGC CAACCTGCTT
CCCGGCCTTA CCACCGTCGC CATCACCGAT ACCGATTGGC GCGGACGCCC CCATGCCCGT
CGCGCCCTGT TCGAGACTGA TGAAGCGGCG TTACCACAAG CTATCGCCGA AACCCGCCCA
CGGCTCGTTG TCTTGCTCAA CCTATTCCGA GACCAACTCG ACCGCTACGG CGAGATTGAC
ACCATCGCCG GCAACTGGCG GCGGGCATTG CAAACCTTAC CCGAAACCAG TACTGTCGTG
TTCAACGCTG ATGATCCGGC TATTGCCGGC CTCACCGAAC ACCTTCCTGC GCGCGTAATC
GGGTTTGGGT TAAATGACAC CCGTCACGCA GTTGCTGCCG CTACGCACAT CGCCGACTCA
CAATTTTGCC AGACGTGCGG CCACCGTTAT CACTACCGGC ACATCTTCTA CGCCCACATC
GGTCACTATA CCTGCCCACA CTGCGGACGC CACCGACCCG ATCCGCAGAT TGCACTGACT
ACGCTTGAAC CACGTGGATT AGACGGCAGT GAGCTTCAGA TCAGACATCC GGGCGGTCAG
CTCCAAATAC ACCTCCCACT CCCCGGCCTC TACAACGCAC AGAATGCACT GGCCGCAACC
GCCGCCGCAT TAGCGCTCGG CATTGCACCG GCAACAATTG GTGTAGCCCT AACCACATTT
CAGGCCGCTT TTGGTCGCAT CGAGCGGATC ACTGCCGGCC CCAATGGCCC ACCAATGCTG
ATTGCGCTGA TTAAAAATCC GGTGGGAGCT TCAGAGACGG TGCGGATGCT CACGGCCACA
ACGACGCGAC CATTACATCT CCTGATCGCG ATCAACGACC GCTTCGCCGA CGGTACCGAC
GTTTCGTGGC TGTGGGATGC CGATTTCGAG CCTTTGGCTG GACGGATCGC TCGCGTGACG
GTCAGCGGTA CGCGCGCCGC CGATATGGCC TTGCGTCTTG ATTATGCTGG GGTTGATGGA
GCCGCGATCA CGGTTATCGA TGATCTGCCA ACAGCCCTCG ATACAGCATT GGCAACCTTA
CCCGTTGGCG AAACCCTCGC CGTACTACCG ACCTATACCG CTATGCTCGA CCTCCGCGCC
GAGATCGCCC GCCGTGGCTG GGCCAAACCG TTTTGGGAAA CCTGA
 
Protein sequence
MSTVTIYRMN HLRTTVALAL GRTARILSRR FHLGGGTSLP GQIARSIEPA ILTTICTALP 
DGVILIAGTN GKTTTSRMLA AILEHTGEPL LHNRAGANLL PGLTTVAITD TDWRGRPHAR
RALFETDEAA LPQAIAETRP RLVVLLNLFR DQLDRYGEID TIAGNWRRAL QTLPETSTVV
FNADDPAIAG LTEHLPARVI GFGLNDTRHA VAAATHIADS QFCQTCGHRY HYRHIFYAHI
GHYTCPHCGR HRPDPQIALT TLEPRGLDGS ELQIRHPGGQ LQIHLPLPGL YNAQNALAAT
AAALALGIAP ATIGVALTTF QAAFGRIERI TAGPNGPPML IALIKNPVGA SETVRMLTAT
TTRPLHLLIA INDRFADGTD VSWLWDADFE PLAGRIARVT VSGTRAADMA LRLDYAGVDG
AAITVIDDLP TALDTALATL PVGETLAVLP TYTAMLDLRA EIARRGWAKP FWET