Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2945 |
Symbol | |
ID | 7268818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3608837 |
End bp | 3610261 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643567767 |
Product | domain of unknown function DUF1727 |
Protein accession | YP_002464241 |
Protein GI | 219849808 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.833945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00605856 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCCACCG TGACTATCTA CCGTATGAAC CATTTACGCA CTACTGTCGC ATTAGCCTTG GGACGTACCG CCAGAATTCT CTCCCGCCGT TTCCATCTCG GCGGCGGGAC GAGCTTACCC GGTCAAATCG CCCGCTCAAT TGAACCGGCA ATCTTGACCA CCATTTGCAC GGCATTACCC GATGGTGTGA TTCTGATCGC CGGCACCAAC GGGAAGACCA CGACGAGTCG CATGTTAGCG GCCATTCTCG AACATACCGG CGAACCACTG TTGCACAACC GCGCCGGTGC CAACCTGCTT CCCGGCCTTA CCACCGTCGC CATCACCGAT ACCGATTGGC GCGGACGCCC CCATGCCCGT CGCGCCCTGT TCGAGACTGA TGAAGCGGCG TTACCACAAG CTATCGCCGA AACCCGCCCA CGGCTCGTTG TCTTGCTCAA CCTATTCCGA GACCAACTCG ACCGCTACGG CGAGATTGAC ACCATCGCCG GCAACTGGCG GCGGGCATTG CAAACCTTAC CCGAAACCAG TACTGTCGTG TTCAACGCTG ATGATCCGGC TATTGCCGGC CTCACCGAAC ACCTTCCTGC GCGCGTAATC GGGTTTGGGT TAAATGACAC CCGTCACGCA GTTGCTGCCG CTACGCACAT CGCCGACTCA CAATTTTGCC AGACGTGCGG CCACCGTTAT CACTACCGGC ACATCTTCTA CGCCCACATC GGTCACTATA CCTGCCCACA CTGCGGACGC CACCGACCCG ATCCGCAGAT TGCACTGACT ACGCTTGAAC CACGTGGATT AGACGGCAGT GAGCTTCAGA TCAGACATCC GGGCGGTCAG CTCCAAATAC ACCTCCCACT CCCCGGCCTC TACAACGCAC AGAATGCACT GGCCGCAACC GCCGCCGCAT TAGCGCTCGG CATTGCACCG GCAACAATTG GTGTAGCCCT AACCACATTT CAGGCCGCTT TTGGTCGCAT CGAGCGGATC ACTGCCGGCC CCAATGGCCC ACCAATGCTG ATTGCGCTGA TTAAAAATCC GGTGGGAGCT TCAGAGACGG TGCGGATGCT CACGGCCACA ACGACGCGAC CATTACATCT CCTGATCGCG ATCAACGACC GCTTCGCCGA CGGTACCGAC GTTTCGTGGC TGTGGGATGC CGATTTCGAG CCTTTGGCTG GACGGATCGC TCGCGTGACG GTCAGCGGTA CGCGCGCCGC CGATATGGCC TTGCGTCTTG ATTATGCTGG GGTTGATGGA GCCGCGATCA CGGTTATCGA TGATCTGCCA ACAGCCCTCG ATACAGCATT GGCAACCTTA CCCGTTGGCG AAACCCTCGC CGTACTACCG ACCTATACCG CTATGCTCGA CCTCCGCGCC GAGATCGCCC GCCGTGGCTG GGCCAAACCG TTTTGGGAAA CCTGA
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Protein sequence | MSTVTIYRMN HLRTTVALAL GRTARILSRR FHLGGGTSLP GQIARSIEPA ILTTICTALP DGVILIAGTN GKTTTSRMLA AILEHTGEPL LHNRAGANLL PGLTTVAITD TDWRGRPHAR RALFETDEAA LPQAIAETRP RLVVLLNLFR DQLDRYGEID TIAGNWRRAL QTLPETSTVV FNADDPAIAG LTEHLPARVI GFGLNDTRHA VAAATHIADS QFCQTCGHRY HYRHIFYAHI GHYTCPHCGR HRPDPQIALT TLEPRGLDGS ELQIRHPGGQ LQIHLPLPGL YNAQNALAAT AAALALGIAP ATIGVALTTF QAAFGRIERI TAGPNGPPML IALIKNPVGA SETVRMLTAT TTRPLHLLIA INDRFADGTD VSWLWDADFE PLAGRIARVT VSGTRAADMA LRLDYAGVDG AAITVIDDLP TALDTALATL PVGETLAVLP TYTAMLDLRA EIARRGWAKP FWET
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