Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2931 |
Symbol | |
ID | 7268804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3593917 |
End bp | 3595608 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643567753 |
Product | protein serine phosphatase with GAF(s) sensor(s) |
Protein accession | YP_002464227 |
Protein GI | 219849794 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0258566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.261187 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTTTGC GTGTCGCCCT CGATGCAGCG CTTACACATA TTCTAGAGCT AACCGGCTTA GAGGCCGGCT GGATCTATCT CCGCGATGAG CGAGATCAGT TCATCCTTGC CGCTCGCCAT CGGCTCCCGC CAGCTCTCAA CTATCCCGGG TTAGCCTGGC AAGGTGAATG CGCGTGTCAG GTGGCATGCC AAACCGGCCA ACTCCGCGAG CCATCGCTCA TTGACTGTTC GCGGCTACGC ATTGCCGTTG GGGATAAGCG CGGTCTTTCC CACCACGTTT CGGTCGAGTT GCACGATGGC CTACGCACAG TTGGTTTACT CAACCTCGCG ACGAGTCGTT GGGCGCGACT TGCAATTGCC GATCAACATC TGATCGCTGC TATTGGTCAC ATATTGGGGA CGGCTATCGC CCAAGCACGT CTCTATGCAG AAGTAAGCGT TCGACGCGGA CAAGAACGAC GCGCCTTACT GTCACTCTCA CAAGAGTTAC TCGGCAGTGA CGACCTTGAG CCGACGTTGC AGCGGCTTCT CCGCATCGGC ACTCGCTTAC TCGACGCCGA TGCCTGTGCG TTTATCGAGG CCGATGAAGA GGGCGGACGC GCTATCTTAC GGGCATGTCA TGGCTGGGAG TTACCATCAG ATCAGGCTTG GCCGATGATC CTCGATGATG AGCATCCACA CTTGTGGTAT TTGCCAGAAC GCAGCAGCCA ACTACCGGCA GAAACCCTCC AACGCTTACC ACCACTCTTA CGCCGACAAA ACTTTCAAGG TCATCTTGCG GTACCGATTG AGCTTGCCGG CACACCGATC GGCCTGCTGA TGGTCAATAC TGTTTCCAGC CGTACCTTTC TCGATAGTGA AGCAGAGCTG CTCGGCCTAC TTGCCAGCCA ATTAGCCCAA TTGATCGACC GTGAACGACT TCATCAGGCA GAGCTTGCGC GTCAACGGCT CGAGCGTGAA CTCGATTTGG CGAGTGAAAT ACAGGCGAGT TTTTTACCCG ATTGTTGTCC ACTGCTACCG GGCTGGCACA TTGAAGCCTT CTACCGCGCC GCCCGCCGCG TCGGCGGCGA TTTTTACGAT TTTATCGAGA CACCACCCAC CGCCTCCGGC CATGATCCAC GCTTCGGGAT AGTTATTGCC GATGTCACCG ATAAAGGCGT CCCGGCAGCC CTCTTTATGG CCCTTTCACG CACCATCTTG CGGGCAAGTG CCATCGACGG TCGACCGCCG GTTGCCGTCC TCCAACGTGC TAATCGCATT ATCCTCGCCG ACTCGCGCGC CGGTCTGTTC GTTACTTGCT TCTATGCCCT GCTTGACCCA AGCACCGGAC TTCTCACATA TGCCAACGGT GGTCATAATT ACCCTTTACT CTATCAACGG GCTACCGGGC AGGTTACACC GCTCGCTGCA CAAGGGATTG TGCTTGGCAT CATTCCCGAT CCGCAGTTTA CACCTGGCGA AATCATCCTC GAACCGGGCG ATGTTGTGCT GTTCTACACA GATGGGATCA CCGAAGCGAT GAATCCACAG CGCGAACTAT TCGGTGATGA GCGCTTGTCC GCAGTACTAC GCTCCGTCAG TCACCTCTCA CCACGCGAGA TTGTGGAGGC CATCCTTCAA GCGGTCTCCG CCTTCGTCGG TGATACTCCG CAGGCCGACG ATATGACCAT GGTGGTACTC AAGCGGGTGT AA
|
Protein sequence | MILRVALDAA LTHILELTGL EAGWIYLRDE RDQFILAARH RLPPALNYPG LAWQGECACQ VACQTGQLRE PSLIDCSRLR IAVGDKRGLS HHVSVELHDG LRTVGLLNLA TSRWARLAIA DQHLIAAIGH ILGTAIAQAR LYAEVSVRRG QERRALLSLS QELLGSDDLE PTLQRLLRIG TRLLDADACA FIEADEEGGR AILRACHGWE LPSDQAWPMI LDDEHPHLWY LPERSSQLPA ETLQRLPPLL RRQNFQGHLA VPIELAGTPI GLLMVNTVSS RTFLDSEAEL LGLLASQLAQ LIDRERLHQA ELARQRLERE LDLASEIQAS FLPDCCPLLP GWHIEAFYRA ARRVGGDFYD FIETPPTASG HDPRFGIVIA DVTDKGVPAA LFMALSRTIL RASAIDGRPP VAVLQRANRI ILADSRAGLF VTCFYALLDP STGLLTYANG GHNYPLLYQR ATGQVTPLAA QGIVLGIIPD PQFTPGEIIL EPGDVVLFYT DGITEAMNPQ RELFGDERLS AVLRSVSHLS PREIVEAILQ AVSAFVGDTP QADDMTMVVL KRV
|
| |