Gene Cagg_2922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2922 
Symbol 
ID7268794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3585712 
End bp3588084 
Gene Length2373 bp 
Protein Length790 aa 
Translation table11 
GC content57% 
IMG OID643567743 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_002464218 
Protein GI219849785 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.529423 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTATC CACTGGTATT GATTGCACTA GTCGCAGCAC CGTTGGCGCT GATTGCTCGC 
GTTTCCGGTC GTGAACGGAT TGCGTGGGGG TTGGCTCTGA TCCCGCTGGC GATCTTTGGC
TTGACCCTCG TACAGGCCGG CCCGGTCTGG TCTGGCGGCC AAGTCGCTGA GCGGATCGAT
TGGGTACCGG CGTTGGGGCT TCAGCTTAGC TTTACCCTTG ATGGGTTAAG TTTACTCTTC
GCGCTGATTA TCAGCGGGAT CGGGACGCTG ATCGTCGGTT ATGCCGGTCA TTATCTTGCC
AAGGACAGTG GTCTGGGCCG CTTTCTAGCC TACCTGATGC TGTTTATGGG GGCAATGCTC
GGATTGGTAT TGGCCGGTAA TGTACTGACG ATGTTCGTGT TCTGGGAATT GACCTCGGTT
ACGTCCTACC TGCTGATCGG CTACAAGCAC GATTACGCCG ATGCCCGGCG TGGCGCGTTG
CATTCACTTC TCGTGACCGG TGGTGGTGGG TTGGCACTGC TGGTTGGCTT GCTGTTGTTG
GGGCAGGCTA CCGGGAGTTA CGAGTTGAGC GACATTCTGG CCGCCGGTGA TCGCTTGCAG
GCCCATGCAC TTTACCCAGC CGCAGTGGTG TTGATCCTTA TAGGCTGTTT TACCAAGTCG
GCCCAAGTTC CGTTCCACTT CTGGTTGCCG GGGGCAATGC AAGCGCCTAC GCCGGCGAGC
GCTTTCCTCC ATTCGGCAAC GATGGTCAAG GCCGGTGTCT ACTTGATGGC ACGGCTCAGC
CCGGCACTGG GCGGTACCGC CCTATGGGAC GTGACACTGG CCGTGGTTGG TGGTACTACC
ATGACCTTCG CCGCAATTGT GGCGATGCGT CAGTTCGATC TCAAGGCGAT GCTCGCCTAT
ACTACCATCA GTATGCTAGG TGCTTTGACA ATGCAGATCG GTCTGGGTGG TAAGTATGGC
GCTGAAGGTG TCGCGACCAA TATTCTGGCC CATGCCCTTT ATAAATCGGC CCTGTTCATG
CTGGCCGGTG TGATTGATCA TGAGTGTGGA ACGCGCGATC TGCGGCGGCT GGGTGGGCTA
CGTTCGTATA TGCCGATCAC GATGGTGATT ACAGCGTTGG CTCTGCTTTC GTTTGGTGGT
ATTCCGGTAA TGTTTGGTTT TGTTGCCAAA GAGCTGATGC TGGAGGCGGC CCTCGAGACC
GAACTCGGTG CAACGCTCAG TGTGCTGGCA GTGGCAGCAA TTGCCGTGAC CGCAGTGGCG
TATCTGATTA CCGGCTGGCG GTTGTTTAGC AATACCTTTC TCGGTCAGCG CAGCATGGCG
GCTATGCAGC AACACGTCAC CGACCCGGTG CCGGGCATGC TGATCGGCCC CGGTGTGCCG
GCCTTGTTGT CGCTGCTCAT CCCTCTGGCA TTGCTCGGCC CGATAAGCGG ATTGATCGGG
CCGGCCAGCT CGGCGATCTA CGGTAAGGCG CTTGAGGTCG AATTGGCCCT CTGGCACGGG
ATCAATCCGG CGCTGCTCGT CAGCCTTGGC GCGATTGTGA TGGGCGCAGT GTTGGCACGC
TTTGGTGAGC AATTGGCGAA TCTGCGTGGT TGGCCGGTGT GGTCGCGGGG CGATATGATC
TTCGACCGCC TGATTGAACA AACGCTGGCC GGCGCTACGG CGTTGACCCG CACGCTCCAA
TCGGGTCAGT TGCGACGCTA TATCTTGATC ACCGCACTGA CGATGTTGGT ATTTGTTGGG
GTGCCGTTTG TGAGGTTTGG TCTCGATGCG GTTCGCTTCG ACTTCGATCC GCAATTGCAA
TTTTACGAGA TACTGGCCGC GTCGCTCATT CCCATTGGCG TGATCGCTAC TATTCGGGCA
CGTACCCGCT TGGGAGCCAT TATTGCTGTC GGCGTGGTCG GTGCGATGGT TTCGCTCCTG
TTCGTGCTCT TCTCGGCTCC CGATCTGGCC TTAACCCAAC TGTTGATCGA AGTGCTCTCT
ACCGTCTTTT TGTTGCTCGT CTTCTCAGTT CTGCCGGTGC GGTTCGAGAG CTTTTCGGCG
GCGTGGGTGC GGCGACGCGA TGCGATCATC GCAACCGTGA TGGGCGTACT GATGGGCGGT
TTGGTATTGG CTATCGCTAC CAATACGTCC TTCGCTTCAT TGGCTCCGTT CTTTCTCGAA
AATAGCCTCG CGAAGGGCAA AGGCGCTAAC GTGGTCAACG TGATTTTGGT TGACTTCCGT
GGTTTCGATA CCATGGGCGA GATTACCGTC TTGTTCATTG CTCTGCTCGG TATCTACGGG
TTGTTGCGTC TACGACAGGG GAAAGATAAT GTCACACCGG AACGAGTTCC CACGACCGAA
CCGGTCGGCG AACCGGTCGA TACCCAGAGA TAG
 
Protein sequence
MLYPLVLIAL VAAPLALIAR VSGRERIAWG LALIPLAIFG LTLVQAGPVW SGGQVAERID 
WVPALGLQLS FTLDGLSLLF ALIISGIGTL IVGYAGHYLA KDSGLGRFLA YLMLFMGAML
GLVLAGNVLT MFVFWELTSV TSYLLIGYKH DYADARRGAL HSLLVTGGGG LALLVGLLLL
GQATGSYELS DILAAGDRLQ AHALYPAAVV LILIGCFTKS AQVPFHFWLP GAMQAPTPAS
AFLHSATMVK AGVYLMARLS PALGGTALWD VTLAVVGGTT MTFAAIVAMR QFDLKAMLAY
TTISMLGALT MQIGLGGKYG AEGVATNILA HALYKSALFM LAGVIDHECG TRDLRRLGGL
RSYMPITMVI TALALLSFGG IPVMFGFVAK ELMLEAALET ELGATLSVLA VAAIAVTAVA
YLITGWRLFS NTFLGQRSMA AMQQHVTDPV PGMLIGPGVP ALLSLLIPLA LLGPISGLIG
PASSAIYGKA LEVELALWHG INPALLVSLG AIVMGAVLAR FGEQLANLRG WPVWSRGDMI
FDRLIEQTLA GATALTRTLQ SGQLRRYILI TALTMLVFVG VPFVRFGLDA VRFDFDPQLQ
FYEILAASLI PIGVIATIRA RTRLGAIIAV GVVGAMVSLL FVLFSAPDLA LTQLLIEVLS
TVFLLLVFSV LPVRFESFSA AWVRRRDAII ATVMGVLMGG LVLAIATNTS FASLAPFFLE
NSLAKGKGAN VVNVILVDFR GFDTMGEITV LFIALLGIYG LLRLRQGKDN VTPERVPTTE
PVGEPVDTQR