Gene Cagg_2916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_2916 
SymbolpanC 
ID7268788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp3579636 
End bp3580469 
Gene Length834 bp 
Protein Length277 aa 
Translation table11 
GC content58% 
IMG OID643567737 
Productpantoate--beta-alanine ligase 
Protein accessionYP_002464212 
Protein GI219849779 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.110502 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTTG TGCATACGAT AGCAGAAGCA CGCCGCGCCC GAGCGGCGTT TGACGAACTA 
GGTTTTGTGC CGACAATGGG CTATCTGCAC CAAGGTCATT TGGCGCTCGT CGAGCGGGCG
CGCGCCGAAT GCCCGGCGGT GGCAGTGAGT ATTTTTGTTA ATCCCACCCA ATTCGGCCCA
CACGAAGATT ATGCCCGCTA TCCGCGCGAC ACGGCGCGTG ATCTGGCGCT ACTTGAGGCC
GCCGGGGTCG ATCTGGTATT CATCCCAACC GTCGAAGAGA TGTATCCGGC CGGTTTCGGC
ACGTATGTCA TCCAGCCTGC CGCCGACGAG GTGTTGGAAG GGGCGGCCCG CCCCGGTCAT
TTCCGAGGTG TGGCAACGGT AGTATGCAAA TTGTTTAACA TCATTCAGCC GACCAAGAGC
TATTTTGGGC AGAAGGACGC TCAACAGACC GTCGTTGTGC GACAGATGGT ACGTGATCTG
AACATTCCGG TCGAGATTGT GATTGTGCCA ACAGTGCGCG AGCCGGACGG ATTGGCCCTG
AGTAGTCGGA ATGTGTATCT CACCCCAGAG CAACGAGCGG CGGCTCCGGT GCTGTACCGC
GCCTTACGAG CGGCCGCCGA ACGCTACGCT GCTGGTGAGC GGAGCGGTGA GGTGCTACGG
GCGGTGATGC GTGAGGTATT GTCGACAGAG CCGTTGGCAA AACCGGAATA CGTTAGTGTT
GCGCATCCAC ACACATTACG TGAGCTGGAT CAGATTGGAC CGGAAGGGGC ATTGCTGTCG
ATGGCGGTTC GATTCGATCA GGTCCGGTTA ATCGACAATT GGTTGTTATT GTAG
 
Protein sequence
MQVVHTIAEA RRARAAFDEL GFVPTMGYLH QGHLALVERA RAECPAVAVS IFVNPTQFGP 
HEDYARYPRD TARDLALLEA AGVDLVFIPT VEEMYPAGFG TYVIQPAADE VLEGAARPGH
FRGVATVVCK LFNIIQPTKS YFGQKDAQQT VVVRQMVRDL NIPVEIVIVP TVREPDGLAL
SSRNVYLTPE QRAAAPVLYR ALRAAAERYA AGERSGEVLR AVMREVLSTE PLAKPEYVSV
AHPHTLRELD QIGPEGALLS MAVRFDQVRL IDNWLLL