Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2916 |
Symbol | panC |
ID | 7268788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3579636 |
End bp | 3580469 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643567737 |
Product | pantoate--beta-alanine ligase |
Protein accession | YP_002464212 |
Protein GI | 219849779 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.011824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.110502 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTTG TGCATACGAT AGCAGAAGCA CGCCGCGCCC GAGCGGCGTT TGACGAACTA GGTTTTGTGC CGACAATGGG CTATCTGCAC CAAGGTCATT TGGCGCTCGT CGAGCGGGCG CGCGCCGAAT GCCCGGCGGT GGCAGTGAGT ATTTTTGTTA ATCCCACCCA ATTCGGCCCA CACGAAGATT ATGCCCGCTA TCCGCGCGAC ACGGCGCGTG ATCTGGCGCT ACTTGAGGCC GCCGGGGTCG ATCTGGTATT CATCCCAACC GTCGAAGAGA TGTATCCGGC CGGTTTCGGC ACGTATGTCA TCCAGCCTGC CGCCGACGAG GTGTTGGAAG GGGCGGCCCG CCCCGGTCAT TTCCGAGGTG TGGCAACGGT AGTATGCAAA TTGTTTAACA TCATTCAGCC GACCAAGAGC TATTTTGGGC AGAAGGACGC TCAACAGACC GTCGTTGTGC GACAGATGGT ACGTGATCTG AACATTCCGG TCGAGATTGT GATTGTGCCA ACAGTGCGCG AGCCGGACGG ATTGGCCCTG AGTAGTCGGA ATGTGTATCT CACCCCAGAG CAACGAGCGG CGGCTCCGGT GCTGTACCGC GCCTTACGAG CGGCCGCCGA ACGCTACGCT GCTGGTGAGC GGAGCGGTGA GGTGCTACGG GCGGTGATGC GTGAGGTATT GTCGACAGAG CCGTTGGCAA AACCGGAATA CGTTAGTGTT GCGCATCCAC ACACATTACG TGAGCTGGAT CAGATTGGAC CGGAAGGGGC ATTGCTGTCG ATGGCGGTTC GATTCGATCA GGTCCGGTTA ATCGACAATT GGTTGTTATT GTAG
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Protein sequence | MQVVHTIAEA RRARAAFDEL GFVPTMGYLH QGHLALVERA RAECPAVAVS IFVNPTQFGP HEDYARYPRD TARDLALLEA AGVDLVFIPT VEEMYPAGFG TYVIQPAADE VLEGAARPGH FRGVATVVCK LFNIIQPTKS YFGQKDAQQT VVVRQMVRDL NIPVEIVIVP TVREPDGLAL SSRNVYLTPE QRAAAPVLYR ALRAAAERYA AGERSGEVLR AVMREVLSTE PLAKPEYVSV AHPHTLRELD QIGPEGALLS MAVRFDQVRL IDNWLLL
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