| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2911 |
|---|
| Symbol | |
|---|
| ID | 7268783 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3571169 |
|---|
| End bp | 3574543 |
|---|
| Gene Length | 3375 bp |
|---|
| Protein Length | 1124 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643567732 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_002464207 |
|---|
| Protein GI | 219849774 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.965385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0176228 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAC TTCTACGAGC ACAGCGGCGG CTCTGGGCTG CTATAGAACA GCAAACCACT
ACACCGCCTA CTCAACATCG TCGCATTTAT CAACACATCA AACACCAACT CGTCACTCAC
CCGGACGGTG AGTATGGGGT ATGGAGCATC TTACGTCAAC GCGCCGATCC GGCGCTCTAC
AAGCCACAAC GGCTGAGTGA CGTGATCGAA GAGACGTTAC TTGAGGATAA CCAGCCCATC
ACCGTACTCC GTAGCCCGAG CGGTCACTAC CTGCGCTTGA GCACAGCCGA GCGTGAGTTG
TGGCAGGCAA TGGATGGCAC GCGCACCATT GCCCAACTAG CCACCATGGG CTTTCTGCGC
TTTAAGCAAC TGTTGCCGGT TGCCGACTTG GTAGAAACCC TGCGCGCACA AGGATTTCTC
ACCGATACAT CGGTCGGCGT GTATCGCCAT TTACGCCACT ATCTTGCACA GCAAACTGTC
GAAGGGATCG GGCAGCGTCT GTTGAGCTTC ACCCATGGCC GTAGCTTTGA GCTACAGCAT
GTGGATAGAT GGTTCGATCT GCTGTACCGA TGGGGTGGAC GCTGGTTCTT TACCCGTTTC
TTTGCAATCG TGCTTGGCCT GCTGACGATT ATCGGTATCA TCTGCTACTT TTTGCCGGGA
GTCAGTGGTA GTGATCTCGT GAGCAACGAA CATCTTGCCG GCGATATGTT GATGTTGGGA
ATGGCGCTGT TTATCACGCT CACACTCCAC GAAATCGCGC ATGGGTTGGC CGTTAAACAT
TTTGGTCGGC AGGTCGGACG AGCGGGGATT ATGCTCTACT TCGGGATGCC GGCCGCCTTC
GTTGATACAA GTGACATATG GTTGGCGCCG CGTTCGGCCC GTATGCTGGT CTCGTTGGCC
GGGCCACTAT GTGACCTGCT CGTCGGATCG CTGGCCGCGA TCATTGCGTG GGCAGCGCCA
GAGACGTTAG GCGGCATATG GATGCGTCGC ATTGCAACCG CTTCGTACCT GACTGCGCTC
TTCAACTTCA ACCCGCTACT CGAACTTGAC GGCTATTTCA TCTTGGTCGA CGCCTTACGC
TTGCCAAACC TGCGCAATCG TGCATTGGGA TTTATTGGCG GACCATTGTG GCAAAAAATC
CGATCACGCA GTCCGTTGAA CCGGGAGGAG CGCATTTTTG CCGGGTACGG ACTATTGAGC
GCAATCTATA CCGGTGTAGC GGTCGTGATG GCGACCCTCT TCTGGCAACG CCAATTTGCG
AGTATGGTTG GTGAACTCTG GGCGAGTAGC TGGTTCGGAC AACTGCTGGC AATCTTGATC
TTTGGGCTGG TGATCGTCCC TTTGATTATC GGTATCATCC TGGCCGGTTG GGGGTTGGTA
CGAGCCGCTG CCGACTGGAT GATACGACGC GGGTACACGC GCAACCCATT GCTGATCGCA
ACCACGTTTG GTCTACTGGC GCTGACGAGC GGACTATTCC CGCTACGGTT TGGGGTGGGT
TGGGAAACCG GCCTCGTGTT GACCGGATGG TGGATGGTAG CCGTAATCGT ACAAGGGTAT
CTACAAAGTG ACTATGCAGG AGCGTGGATC GGCCGTGCCC TCGCCAGCTT CTTACTCATC
AGCCTTATTG AAATGATAGC GCAAGCCGGC TACCTCATCG CCCCCGATGC CGTGCGCGCC
TGGTCAGGCT TAGAGATTGC CGGGTACGCC TTGCTCTTGT TTGCCGGATT CATCGCATTG
CTTGATGTCA ACTTACAGCA ACAGAACAGC AGCCAATTGA TCGCCAGTGC CTTACTGCTG
ACCCTAGCTT TTCCATTAGG AGTCATTGCT GCCGAACTGA TCAGGATCGC TCACCCAGAG
TATAGTTCAC TCTGGGCATT AATCGCCGCC GTGCCTATCT ACAGTGGAGT GATCGGTCAA
GCACTGCTAT TGCCACTGCT CATCAGTTTG CGCGATACCC GTCTCTTTTG GAGCTGGCTG
CTGCTCTGGC TAGGAATCCT TATCCAAATC GGGAGCTATC TACTCGAACT GCTACCGGAG
TGGCGCAACA CTCCGCTTGC ACTCGTCAGC CTGATCGTAG CGGCCGGTCT GTGGGCCGCT
GCATGGAGTA CCCATCTCGT CACCTTGCGC AGTGTTAGTC TGAGTGGGTT AAGCTGGCCG
CTCACGCCTG CACCCGGTGA GACGGTACGG TTACAAGATG CTTTTCGGCA TTTGTACATT
GGTTTGTACC GCCTCTTGCG CAATAATTAC GGTATCCAAC GCACGCGAAC CCTCGACGAC
CGGATGGACG TATTGGCAGC GACGGCAAAC TGGGAGATCA CTTTTGATCG CGATCAAGTG
CGGATCGGCC CAACCGTGCA GAGCCTTCCA CTCGACGAGC AAGGAGCGCG GTACGCCGAG
GTCTTACAGT ATGCGGTAAC GATCCTCGAA CAATTGGCCG GTCGGACCTT TGCCCATCGC
GCACTAGTGG CTGCGTATGA CGCATTGCCA TGGCCGGAAC GGGAAGCACT CGAACGACAC
TGCTTAGCGC AGATGGTGAA GGCGTATGAC ATCTTGCACA CCTTCGGGAA CGCACGTGAA
GCCCGGATCA GACTGCTACG CCAGATCGAA CTATTTGCTA CGTGCGACGA TCACGAACTA
CAAGAATTAG CTGCGGCGTT TACCAGCCAA CGAGTACACG CCGGTGAGAT CATTTTAAGC
ACCGGCGAGC CACCACGAGG GATTTGGGTG ATCGAAACCG GCGAAATCCT CGCCCGCCAT
GGTGATATGG TCCAAGAGCT GCACCGCGGC GACTACTTTG GCGAATTGCA AGGACCAGAA
ATCACCGACT ACGAATACCG GGCTAGTATC GAGAGCACGC TCCTTTACTT ACCGGCGGGT
GAACTGCAGC GAATGATACA CGAGGCCGCA CCGCACACCG CTGAAGGTGC AGAACTTCTC
AAGCGAATGC GGTTACTTGA GCGAGTATCA CTCTTTGCCA ACCTACCGCG TGCTCAACTA
CGAGAACTCG CACGAGCGGC TATCCACAAA ACAGTAGAGG CCCGCCACAT CCTGATCCGA
CAAGGTCGGC CTAACGGCTA TCTGTACATC ATTGCCGACG GACAAGTAGC CGTCTTACGA
CGAGAAGAGA CAGAACAAGG CCCACGTGGG AACGTTCGCT TGGTCGCGCG GCTTGGCCCG
GCCGAATTTT GTGGCGAGGT AGAACTGATC CGTGGCACAT TACCGGTAGC GACTGTTATC
GCACTCACAC CACTAGACGT AATCGCAATA CCGCATCGCG TGTTGAAACA GGTGATGGTA
GGCGGTGATC ACATCATCCA CCAATTTGAG CAGATCGGTA GCGGTCGATT GTTGGAGTTA
CGCACCCAAA GCTAG
|
|---|
| Protein sequence | MTQLLRAQRR LWAAIEQQTT TPPTQHRRIY QHIKHQLVTH PDGEYGVWSI LRQRADPALY
KPQRLSDVIE ETLLEDNQPI TVLRSPSGHY LRLSTAEREL WQAMDGTRTI AQLATMGFLR
FKQLLPVADL VETLRAQGFL TDTSVGVYRH LRHYLAQQTV EGIGQRLLSF THGRSFELQH
VDRWFDLLYR WGGRWFFTRF FAIVLGLLTI IGIICYFLPG VSGSDLVSNE HLAGDMLMLG
MALFITLTLH EIAHGLAVKH FGRQVGRAGI MLYFGMPAAF VDTSDIWLAP RSARMLVSLA
GPLCDLLVGS LAAIIAWAAP ETLGGIWMRR IATASYLTAL FNFNPLLELD GYFILVDALR
LPNLRNRALG FIGGPLWQKI RSRSPLNREE RIFAGYGLLS AIYTGVAVVM ATLFWQRQFA
SMVGELWASS WFGQLLAILI FGLVIVPLII GIILAGWGLV RAAADWMIRR GYTRNPLLIA
TTFGLLALTS GLFPLRFGVG WETGLVLTGW WMVAVIVQGY LQSDYAGAWI GRALASFLLI
SLIEMIAQAG YLIAPDAVRA WSGLEIAGYA LLLFAGFIAL LDVNLQQQNS SQLIASALLL
TLAFPLGVIA AELIRIAHPE YSSLWALIAA VPIYSGVIGQ ALLLPLLISL RDTRLFWSWL
LLWLGILIQI GSYLLELLPE WRNTPLALVS LIVAAGLWAA AWSTHLVTLR SVSLSGLSWP
LTPAPGETVR LQDAFRHLYI GLYRLLRNNY GIQRTRTLDD RMDVLAATAN WEITFDRDQV
RIGPTVQSLP LDEQGARYAE VLQYAVTILE QLAGRTFAHR ALVAAYDALP WPEREALERH
CLAQMVKAYD ILHTFGNARE ARIRLLRQIE LFATCDDHEL QELAAAFTSQ RVHAGEIILS
TGEPPRGIWV IETGEILARH GDMVQELHRG DYFGELQGPE ITDYEYRASI ESTLLYLPAG
ELQRMIHEAA PHTAEGAELL KRMRLLERVS LFANLPRAQL RELARAAIHK TVEARHILIR
QGRPNGYLYI IADGQVAVLR REETEQGPRG NVRLVARLGP AEFCGEVELI RGTLPVATVI
ALTPLDVIAI PHRVLKQVMV GGDHIIHQFE QIGSGRLLEL RTQS
|
|---|
| |